RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 EEDO75530 441 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 CREB1P16220 341 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 PBX2P40425 430 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 NCBP2P52298 156 aaKnown RBP eCLIP5.91□□□□□ -1.46
VCAN-203ENST00000343200 KCNJ11Q14654 390 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SLC44A5Q8NCS7 719 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 LINC01599Q8WXQ3 324 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MOCOSQ96EN8 888 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 FAM173AQ9BQD7 235 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 FBXO5Q9UKT4 447 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 NPFFR2Q9Y5X5 522 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 CEPT1Q9Y6K0 416 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 LRRC37A3O60309 1634 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 HYKKA2RU49 373 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 KCNJ5P48544 419 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MRPS34P82930 218 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.91□□□□□ -1.461e-7■■■■□ 23
VCAN-203ENST00000343200 ZNF791Q3KP31 576 aaPredicted RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 CHST9Q7L1S5 443 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MCATQ8IVS2 390 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 C15orf54Q8N8G6 183 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 OR8J3Q8NGG0 315 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 DUSP26Q9BV47 211 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SRRQ9GZT4 340 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 GRHPRQ9UBQ7 328 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 COQ4Q9Y3A0 265 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ACTL7AQ9Y615 435 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 NFKBIEO00221 500 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ARHGAP33O14559 1287 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 CNTN5O94779 1100 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ENDOD1O94919 500 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ALPIP09923 528 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 NAT2P11245 290 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 CBLP22681 906 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 TGM4P49221 684 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 CASP9P55211 416 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MAP2K5Q13163 448 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 CAMK2DQ13557 499 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 FCN2Q15485 313 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SLC36A3Q495N2 470 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 RAET1GQ6H3X3 334 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ASRGL1Q7L266 308 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MFSD9Q8NBP5 474 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 OR4K17Q8NGC6 315 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 OR5M8Q8NGP6 311 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 EDEM1Q92611 657 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SLC35G5Q96KT7 338 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 TAPBPLQ9BX59 468 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 RAB11FIP5Q9BXF6 653 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 RHBGQ9H310 441 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SOX17Q9H6I2 414 aaPredicted RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 RAB9BQ9NP90 201 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MARCH2Q9P0N8 246 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 RIPK3Q9Y572 518 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 CPQQ9Y646 472 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SMIM30A4D0T7 59 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SOBPA7XYQ1 873 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 RPP40O75818 363 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 THBS1P07996 1170 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 TXNP10599 105 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 RHCEP18577 417 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 LAP3P28838 519 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SPHARQ15513 63 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 C6orf141Q5SZD1 244 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 OR52E8Q6IFG1 317 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SLC51BQ86UW2 128 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 OR4M1Q8NGD0 313 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MUS81Q96NY9 551 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 CYP2S1Q96SQ9 504 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 URM1Q9BTM9 101 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 FZD4Q9ULV1 537 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 LCTP09848 1927 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 A6NIZ1 184 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 E5RJQ4 531 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 BRINP1O60477 761 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 CREG1O75629 220 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ELFN1P0C7U0 828 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 HTR1BP28222 390 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SREBF1P36956 1147 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ZNF280AP59817 542 aaPredicted RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 RAP1BP61224 184 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 DUOXA1Q1HG43 343 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 FNDC3BQ53EP0 1204 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 CES4AQ5XG92 561 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 MON1BQ7L1V2 547 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 NPAS4Q8IUM7 802 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 OR6T1Q8NGN1 323 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 TRMT10AQ8TBZ6 339 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 ARSGQ96EG1 525 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 FNIP2Q9P278 1114 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 TMEM14AQ9Y6G1 99 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 LOC285556D6RIA3 1793 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 C6P13671 934 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 GOT1P17174 413 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ALAS2P22557 587 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 TOB1P50616 345 aaPredicted RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 POU6F2P78424 691 aaPredicted RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 PFKPQ01813 784 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 ITPK1Q13572 414 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 PDZD11Q5EBL8 140 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms