RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 FASNP49327 2511 aaKnown RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 NSG1A0A0A6YYJ2 146 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 A0A0G2JN53 185 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 COPEO14579 308 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 SEMA3DO95025 777 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 PGM3O95394 542 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 TGFB1P01137 390 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 ATP6V1B1P15313 513 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 HIST1H1TP22492 207 aaPredicted RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 CERS1P27544 350 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 DNAJB13P59910 316 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 NAA20P61599 178 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 RPS13P62277 151 aaKnown RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 CPSF6Q16630 551 aaKnown RBP eCLIP9.6□□□□□ -0.875e-7■□□□□ 10.7
TPM3-207ENST00000341372 FRG2Q64ET8 278 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 IGFL2Q6UWQ7 119 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 IGFL3Q6UXB1 125 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 ASB18Q6ZVZ8 466 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 R3HCC1LQ7Z5L2 792 aaKnown RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 CPEB2Q7Z5Q1 589 aaKnown RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 CROCCP2Q86T23 111 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 ZCCHC7Q8N3Z6 543 aaKnown RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 RNF175Q8N4F7 328 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 ARL6IP6Q8N6S5 226 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 BANPQ8N9N5 519 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 METTL21AQ8WXB1 218 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 TSLPQ969D9 159 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 NEIL1Q96FI4 390 aaPredicted RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 APOPT1Q96IL0 206 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 MRGPRX4Q96LA9 322 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 FRG2BQ96QU4 278 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 MTERF1Q99551 399 aaKnown RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 TUBB6Q9BUF5 446 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 CDADC1Q9BWV3 514 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 LHPPQ9H008 270 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 OR51B5Q9H339 312 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 GSTO2Q9H4Y5 243 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 COPS7BQ9H9Q2 264 aaPredicted RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 ZNF160Q9HCG1 818 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 ZNF71Q9NQZ8 489 aaPredicted RBP9.6□□□□□ -0.87
TPM3-207ENST00000341372 KCMF1Q9P0J7 381 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 STK38LQ9Y2H1 464 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 CLDN16Q9Y5I7 305 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 X6R8D5 127 aa9.6□□□□□ -0.87
TPM3-207ENST00000341372 OR2W5A6NFC9 320 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 TTC36A6NLP5 189 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 C22orf46C9J442 243 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 PSMD12O00232 456 aaPredicted RBP9.59□□□□□ -0.87
TPM3-207ENST00000341372 CYR61O00622 381 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 PPP6CO00743 305 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 PLPP1O14494 284 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 CDC123O75794 336 aaPredicted RBP9.59□□□□□ -0.87
TPM3-207ENST00000341372 SUPT7LO94864 414 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 ETHE1O95571 254 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 AVPP01185 164 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 SERPINA7P05543 415 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 ATP5A1P25705 553 aaKnown RBP9.59□□□□□ -0.87
TPM3-207ENST00000341372 ABCD3P28288 659 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 CDH13P55290 713 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 LIM2P55344 173 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 GNGT1P63211 74 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 KLRB1Q12918 225 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 ABRAXAS2Q15018 415 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 C4orf33Q8N1A6 199 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 ACOT4Q8N9L9 421 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 MID2Q9UJV3 735 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 ANAPC2Q9UJX6 822 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 CNTRLQ7Z7A1 2325 aa9.59□□□□□ -0.87
TPM3-207ENST00000341372 A6NL46 340 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 FCHO1O14526 889 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 SUV39H1O43463 412 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 NPHS1O60500 1241 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 BAG2O95816 211 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 ALPPP05187 535 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 PRR35P0CG20 571 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 MYL2P10916 166 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 CHN1P15882 459 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 ITGA3P26006 1051 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 HSD17B7P56937 341 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 AP2B1P63010 937 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 LCP2Q13094 533 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 DDX39BQ13838 428 aaKnown RBP9.58□□□□□ -0.88
TPM3-207ENST00000341372 RCN2Q14257 317 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 NSDHLQ15738 373 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 PLAG1Q6DJT9 500 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 OR4C11Q6IEV9 310 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 KBTBD2Q8IY47 623 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 ZNF595Q8IYB9 648 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 TMEM52Q8NDY8 209 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 TRPC4APQ8TEL6 797 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 PSMF1Q92530 271 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 CSF3RQ99062 836 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 SERPINI1Q99574 410 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 CENPKQ9BS16 269 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 SLC29A3Q9BZD2 475 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 DDX31Q9H8H2 851 aaKnown RBP9.58□□□□□ -0.88
TPM3-207ENST00000341372 SEPSECSQ9HD40 501 aaKnown RBP9.58□□□□□ -0.88
TPM3-207ENST00000341372 C19orf53Q9UNZ5 99 aaPredicted RBP9.58□□□□□ -0.88
TPM3-207ENST00000341372 PLLPQ9Y342 182 aa9.58□□□□□ -0.88
TPM3-207ENST00000341372 HELZ2Q9BYK8 2649 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms