RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ADAMTS15Q8TE58 950 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 RIT1Q92963 219 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 C16orf58Q96GQ5 468 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 PTCHD1Q96NR3 888 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 CDC6Q99741 560 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 CTRCQ99895 268 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 A4GALTQ9NPC4 353 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 ADAP2Q9NPF8 381 aa16.24■□□□□ 0.19
CLDN4-201ENST00000340958 POLR1CO15160 346 aaPredicted RBP16.23■□□□□ 0.19
CLDN4-201ENST00000340958 SUV39H1O43463 412 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 HYAL3O43820 417 aaPredicted RBP16.23■□□□□ 0.19
CLDN4-201ENST00000340958 MT-ND1P03886 318 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 HBQ1P09105 142 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 BMP2P12643 396 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 MAGEA8P43361 318 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 MAPK10P53779 464 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 SERTAD2Q14140 314 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 ATAD3BQ5T9A4 648 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 LPCAT4Q643R3 524 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 RHBDD2Q6NTF9 364 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 AMIGO2Q86SJ2 522 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 BPHLQ86WA6 291 aaPredicted RBP16.23■□□□□ 0.19
CLDN4-201ENST00000340958 GALNT12Q8IXK2 581 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 ST13P4Q8IZP2 240 aaPredicted RBP16.23■□□□□ 0.19
CLDN4-201ENST00000340958 OR2L13Q8N349 312 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 OR10Q1Q8NGQ4 319 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 FAM110BQ8TC76 370 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 SLC38A5Q8WUX1 472 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 SLC9A6Q92581 669 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 PYURFQ96I23 114 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 ACTRT3Q9BYD9 372 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 OLAHQ9NV23 265 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 COL5A1P20908 1838 aaPredicted RBP16.23■□□□□ 0.19
CLDN4-201ENST00000340958 SCN2AQ99250 2005 aa16.23■□□□□ 0.19
CLDN4-201ENST00000340958 SPAARA0A1B0GVQ0 90 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 TXNL4AP83876 142 aaKnown RBP16.22■□□□□ 0.19
CLDN4-201ENST00000340958 ZFP36L1Q07352 338 aaKnown RBP16.22■□□□□ 0.19
CLDN4-201ENST00000340958 IL11RAQ14626 422 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 PRICKLE4Q2TBC4 344 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 GRAMD1BQ3KR37 738 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 GPAT3Q53EU6 434 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 IRAK1BP1Q5VVH5 260 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 ERMP1Q7Z2K6 904 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 PRSS58Q8IYP2 241 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 LILRA2Q8N149 483 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 VWA5B2Q8N398 1253 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 FAM86B1Q8N7N1 296 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 NRG4Q8WWG1 115 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 LZICQ8WZA0 190 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 TMEM19Q96HH6 336 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 SERHL2Q9H4I8 314 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 MKKSQ9NPJ1 570 aaPredicted RBP16.22■□□□□ 0.19
CLDN4-201ENST00000340958 SIDT1Q9NXL6 827 aaKnown RBP16.22■□□□□ 0.19
CLDN4-201ENST00000340958 BAG5Q9UL15 447 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 DUXAA6NLW8 204 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 OPN1SWP03999 348 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 GCGRP47871 477 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 PGDP52209 483 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 E2F1Q01094 437 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 OCA2Q04671 838 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 BIKQ13323 160 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 CYBRD1Q53TN4 286 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 VWA2Q5GFL6 755 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 C16orf62Q7Z3J2 963 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 PATL1Q86TB9 770 aaKnown RBP16.22■□□□□ 0.19
CLDN4-201ENST00000340958 ICA1LQ8NDH6 482 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 ZNF675Q8TD23 568 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 EME1Q96AY2 570 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 OR7D2Q96RA2 312 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 CMKLR1Q99788 373 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 PELOQ9BRX2 385 aaKnown RBP16.22■□□□□ 0.19
CLDN4-201ENST00000340958 APMAPQ9HDC9 416 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 EXD2Q9NVH0 621 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 MAT2BQ9NZL9 334 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 RIMS3Q9UJD0 308 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 C19orf53Q9UNZ5 99 aaPredicted RBP16.22■□□□□ 0.19
CLDN4-201ENST00000340958 MMACHCQ9Y4U1 282 aa16.22■□□□□ 0.19
CLDN4-201ENST00000340958 NCOR2Q9Y618 2525 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 A0A087WV62 115 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 FAM149AA5PLN7 773 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 M0QX08 132 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 GNGT2O14610 69 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 DYRK3O43781 588 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 COQ9O75208 318 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 PDE9AO76083 593 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 TIAF1O95411 115 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 TFPTP0C1Z6 253 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 HOXB6P17509 224 aaKnown RBP16.21■□□□□ 0.19
CLDN4-201ENST00000340958 PEX2P28328 305 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 GCKP35557 465 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 STT3AP46977 705 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 CLCN2P51788 898 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 HPCAP84074 193 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 EXOSC7Q15024 291 aaKnown RBP16.21■□□□□ 0.19
CLDN4-201ENST00000340958 TRIP6Q15654 476 aaKnown RBP16.21■□□□□ 0.19
CLDN4-201ENST00000340958 RPS26P11Q5JNZ5 115 aaPredicted RBP16.21■□□□□ 0.19
CLDN4-201ENST00000340958 MFSD12Q6NUT3 480 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 CBLL1Q75N03 491 aa16.21■□□□□ 0.19
CLDN4-201ENST00000340958 EIF3MQ7L2H7 374 aaKnown RBP16.21■□□□□ 0.19
CLDN4-201ENST00000340958 PAPD5Q8NDF8 572 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms