RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 JUNP05412 331 aaKnown RBP17.73■□□□□ 0.43
SYNE4-202ENST00000340477 PRPS2P11908 318 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 BCKDHAP12694 445 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 PCSK2P16519 638 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 TACR1P25103 407 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 PTGER1P34995 402 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 WDR4P57081 412 aaKnown RBP17.73■□□□□ 0.43
SYNE4-202ENST00000340477 RPP38P78345 283 aaKnown RBP17.73■□□□□ 0.43
SYNE4-202ENST00000340477 MRPS35P82673 323 aaKnown RBP17.73■□□□□ 0.43
SYNE4-202ENST00000340477 SRSF11Q05519 484 aaKnown RBP17.73■□□□□ 0.43
SYNE4-202ENST00000340477 DUSP2Q05923 314 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 FHL5Q5TD97 284 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 GFRALQ6UXV0 394 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 GK5Q6ZS86 529 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 MDGA2Q7Z553 956 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 SULF2Q8IWU5 870 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 FAM13CQ8NE31 585 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 CLHC1Q8NHS4 586 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 PRR7Q8TB68 274 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 KAT2AQ92830 837 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 CTHRC1Q96CG8 243 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 MTERF3Q96E29 417 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF764Q96H86 408 aaPredicted RBP17.73■□□□□ 0.43
SYNE4-202ENST00000340477 FRMD6Q96NE9 622 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 ACBD3Q9H3P7 528 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 THAP1Q9NVV9 213 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 SH3BP4Q9P0V3 963 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 SEC14L3Q9UDX4 400 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 ACOT7O00154 380 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 TFECO14948 347 aaPredicted RBP17.72■□□□□ 0.43
SYNE4-202ENST00000340477 NADKO95544 446 aaPredicted RBP17.72■□□□□ 0.43
SYNE4-202ENST00000340477 CBX7O95931 251 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 FBXO45P0C2W1 286 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 GPX3P22352 226 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 GPC1P35052 558 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 GPR85P60893 370 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 PSPHP78330 225 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 PLGLB1Q02325 96 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 MGAT2Q10469 447 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 TRMT12Q53H54 448 aaKnown RBP17.72■□□□□ 0.43
SYNE4-202ENST00000340477 C6orf136Q5SQH8 315 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 CES4AQ5XG92 561 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF324BQ6AW86 544 aaPredicted RBP17.72■□□□□ 0.43
SYNE4-202ENST00000340477 FAM47EQ6ZV65 393 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 LIX1Q8N485 282 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 CPSF7Q8N684 471 aaKnown RBP17.72■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF441Q8N8Z8 693 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 ARL8AQ96BM9 186 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 EGLN2Q96KS0 407 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 SORT1Q99523 831 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 C1orf50Q9BV19 199 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 ITPAQ9BY32 194 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 TAS2R9Q9NYW1 312 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF639Q9UID6 485 aa17.72■□□□□ 0.43
SYNE4-202ENST00000340477 HMGB1P1B2RPK0 211 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-202ENST00000340477 ACOX3O15254 700 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 S1PR1P21453 382 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 RPS6KA2Q15349 733 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 SMU1Q2TAY7 513 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 KRTCAP3Q53RY4 240 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 SLC22A10Q63ZE4 541 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 FAM26EQ8N5C1 309 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 HSPBAP1Q96EW2 488 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 ZBED6CLQ96FA7 236 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-202ENST00000340477 LCORQ96JN0 433 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-202ENST00000340477 PPP1R36Q96LQ0 422 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 C3orf30Q96M34 536 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 PRPF18Q99633 342 aaKnown RBP17.71■□□□□ 0.43
SYNE4-202ENST00000340477 FAM173AQ9BQD7 235 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 MANSC1Q9H8J5 431 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF395Q9H8N7 513 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-202ENST00000340477 ATAD3AQ9NVI7 634 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 DDX18Q9NVP1 670 aaKnown RBP17.71■□□□□ 0.43
SYNE4-202ENST00000340477 NOP53Q9NZM5 478 aaKnown RBP17.71■□□□□ 0.43
SYNE4-202ENST00000340477 CNIH4Q9P003 139 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 GIMAP2Q9UG22 337 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 BAIAP2L1Q9UHR4 511 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 HAO1Q9UJM8 370 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 MAPRE3Q9UPY8 281 aa17.71■□□□□ 0.43
SYNE4-202ENST00000340477 PLOD3O60568 738 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 TBX19O60806 448 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 UNC5CO95185 931 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 TDGF1P3P51864 188 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 PLCXD2Q0VAA5 305 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 ZNF155Q12901 538 aaPredicted RBP17.7■□□□□ 0.42
SYNE4-202ENST00000340477 EIF2S3LQ2VIR3 472 aaKnown RBP17.7■□□□□ 0.42
SYNE4-202ENST00000340477 ZNF791Q3KP31 576 aaPredicted RBP17.7■□□□□ 0.42
SYNE4-202ENST00000340477 IL23RQ5VWK5 629 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 TMEM107Q6UX40 140 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 DYDC1Q8WWB3 177 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 ADIPOR1Q96A54 375 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 AMDHD1Q96NU7 426 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 GLIPR2Q9H4G4 154 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 NPFFR2Q9Y5X5 522 aa17.7■□□□□ 0.42
SYNE4-202ENST00000340477 A0A087WV62 115 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 TRPC5OSA6NMA1 111 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 NPIPA5E9PKD4 350 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 SLCO1B7G3V0H7 640 aa17.69■□□□□ 0.42
SYNE4-202ENST00000340477 SCAMP2O15127 329 aaKnown RBP17.69■□□□□ 0.42
SYNE4-202ENST00000340477 ZNF354AO60765 605 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms