RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 THEM6Q8WUY1 208 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 MMACHCQ9Y4U1 282 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 EEF1E1-BLOC1S5C9J1V9 151 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 EEF1E1O43324 174 aaKnown RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 DDAH2O95865 285 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 WDPCPO95876 746 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 LYNP07948 512 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 GMPRP36959 345 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ATP12AP54707 1039 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 CSNK2A1P68400 391 aaPredicted RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 CDKL1Q00532 357 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 GRB7Q14451 532 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 CYBRD1Q53TN4 286 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 SVOPLQ8N434 492 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 SIRT6Q8N6T7 355 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 OR5T3Q8NGG3 340 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 L3HYPDHQ96EM0 354 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 PDFQ9HBH1 243 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 GLS2Q9UI32 602 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 A0A096LPI6 279 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ZNF891A8MT65 544 aaPredicted RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 FTCDNL1E5RQL4 147 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 AREL1O15033 823 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 SLC6A8P48029 635 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 NXPH1P58417 271 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 RSPRY1Q96DX4 576 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ZNF559Q9BR84 538 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 FAM192AQ9GZU8 254 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 CDH20Q9HBT6 801 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 G3V3Y1 287 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 ARHGEF15O94989 841 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 IMPA1P29218 277 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 CDK9P50750 372 aaKnown RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 TRA2BP62995 288 aaKnown RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 TRA2AQ13595 282 aaKnown RBP eCLIP12.12□□□□□ -0.47
LIN54-201ENST00000340417 SPATC1Q76KD6 591 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 KMT5CQ86Y97 462 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 UEVLDQ8IX04 471 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 SPRTNQ9H040 489 aaPredicted RBP12.12□□□□□ -0.47
LIN54-201ENST00000340417 SERGEFQ9UGK8 458 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 STOML2Q9UJZ1 356 aa12.12□□□□□ -0.47
LIN54-201ENST00000340417 CENPXA8MT69 81 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 SULT2B1O00204 365 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 CPMP14384 443 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 CLDN8P56748 225 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 TRIM25Q14258 630 aaKnown RBP12.11□□□□□ -0.47
LIN54-201ENST00000340417 OMA1Q96E52 524 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 ZNF597Q96LX8 424 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 DENND2DQ9H6A0 471 aaPredicted RBP12.11□□□□□ -0.47
LIN54-201ENST00000340417 MTHFD2LQ9H903 347 aaPredicted RBP12.11□□□□□ -0.47
LIN54-201ENST00000340417 PRDM9Q9NQV7 894 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 GEMIN8Q9NWZ8 242 aaKnown RBP12.11□□□□□ -0.47
LIN54-201ENST00000340417 SH3PXD2BA1X283 911 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 E2F3O00716 465 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 KRT36O76013 467 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 FESP07332 822 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 TACSTD2P09758 323 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 ANXA8P13928 327 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 RCVRNP35243 200 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 HOXD12P35452 270 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 ECH1Q13011 328 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 LETMD1Q6P1Q0 360 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 ZNF585AQ6P3V2 769 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 ARL5BQ96KC2 179 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 TBX5Q99593 518 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 COQ7Q99807 217 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 SPEF1Q9Y4P9 236 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 CEACAM5P06731 702 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 SP9P0CG40 484 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 FGF3P11487 239 aaPredicted RBP12.11□□□□□ -0.47
LIN54-201ENST00000340417 CXADRP78310 365 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 KANK2Q63ZY3 851 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 SLC22A16Q86VW1 577 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 C10orf82Q8WW14 230 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 ECHDC3Q96DC8 303 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 HSH2DQ96JZ2 352 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 SLC39A3Q9BRY0 314 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 SMOXQ9NWM0 555 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 EMC3Q9P0I2 261 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 LOXHD1Q8IVV2 1947 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 TRIP12Q14669 1992 aaPredicted RBP12.11□□□□□ -0.47
LIN54-201ENST00000340417 TRIOBPQ9H2D6 2365 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 DAPL1A0PJW8 107 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 STK17BO94768 372 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 CLPTM1O96005 669 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 BMP4P12644 408 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 RPS9P46781 194 aaKnown RBP12.11□□□□□ -0.47
LIN54-201ENST00000340417 HTR6P50406 440 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 EEF1A1P68104 462 aaKnown RBP12.11□□□□□ -0.47
LIN54-201ENST00000340417 MYBPC3Q14896 1274 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 CARM1Q86X55 608 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 VRK3Q8IV63 474 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 OR8H2Q8N162 312 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 ZNF283Q8N7M2 679 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 NETO1Q8TDF5 533 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 MOCOSQ96EN8 888 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 HSPBAP1Q96EW2 488 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 SP140LQ9H930 580 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 CBLCQ9ULV8 474 aa12.11□□□□□ -0.47
LIN54-201ENST00000340417 MRPS7Q9Y2R9 242 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms