RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 KCNJ5P48544 419 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 MAN2A2P49641 1150 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 RAD23AP54725 363 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 EXOSC7Q15024 291 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CEBPEQ15744 281 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 MICAQ29983 383 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 USP53Q70EK8 1073 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 RNF44Q7L0R7 432 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF605Q86T29 641 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 OOSP2Q86WS3 158 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 LGI4Q8N135 537 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CAMKVQ8NCB2 501 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 OR10G2Q8NGC3 310 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 OR6T1Q8NGN1 323 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GIPC3Q8TF64 312 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GEMIN6Q8WXD5 167 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC9A6Q92581 669 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 DGCR14Q96DF8 476 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF764Q96H86 408 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 TGM7Q96PF1 710 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SERINC2Q96SA4 455 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 TSC22D3Q99576 134 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 EPYCQ99645 322 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 POLR1BQ9H9Y6 1135 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 DDX18Q9NVP1 670 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 TMEM9Q9P0T7 183 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 MRPS17Q9Y2R5 130 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ENPP4Q9Y6X5 453 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 EML5Q05BV3 1969 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 TGFBR3LH3BV60 316 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 AQP9O43315 295 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GALR3O60755 368 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GADD45GO95257 159 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 IFNW1P05000 195 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 FHP07954 510 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GSTM2P28161 218 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 PPP2R1BP30154 601 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC5A2P31639 672 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 BUD31P41223 144 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 PDX1P52945 283 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 MVKQ03426 396 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 MLIPQ5VWP3 458 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 XAF1Q6GPH4 301 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 B3GNT8Q7Z7M8 397 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 MCATQ8IVS2 390 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 LRRC25Q8N386 305 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 PARP8Q8N3A8 854 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC25A45Q8N413 288 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SPEM1Q8N4L4 309 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ARHGEF39Q8N4T4 335 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 OR4K14Q8NGD5 310 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ZFPM2Q8WW38 1151 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 NCSTNQ92542 709 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CDS1Q92903 461 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ALPK1Q96QP1 1244 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC38A3Q99624 504 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 PIP5K1AQ99755 562 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CCDC3Q9BQI4 270 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GABARAPL1Q9H0R8 117 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC38A1Q9H2H9 487 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CHRDQ9H2X0 955 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SEMA6CQ9H3T2 930 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 RAD21L1Q9H4I0 556 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ADAP2Q9NPF8 381 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 THSD1Q9NS62 852 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 HCN3Q9P1Z3 774 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 P2RX2Q9UBL9 471 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 NDRG4Q9ULP0 352 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CLCA2Q9UQC9 943 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SIT1Q9Y3P8 196 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 PCDHGA6Q9Y5G7 932 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ENTPD2Q9Y5L3 495 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ORC6Q9Y5N6 252 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GMPPBQ9Y5P6 360 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GPC6Q9Y625 555 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CEP192Q8TEP8 1941 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 A0A087WXM4 84 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 NPIPA5A0A0B4J1W7 369 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 A0A1B0GVT2 93 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 TRIM64CA6NLI5 447 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 NPIPA7E9PJI5 369 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC1A7O00341 560 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 TOR1BO14657 336 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 ADAMDEC1O15204 470 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 EMC8O43402 210 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 GUCY1B2O75343 617 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 NPIPA8P0DM63 369 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 CPMP14384 443 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 NR4A1P22736 598 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 TSFMP43897 325 aaKnown RBP6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 LIMS1P48059 325 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 SEPHS1P49903 392 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 HLCSP50747 726 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 OR1D5P58170 312 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 BTG2P78543 158 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 CFHR1Q03591 330 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 TGM3Q08188 693 aa6.93□□□□□ -1.3
SRFBP1-201ENST00000339397 BIRC2Q13490 618 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms