RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 UMODL1-AS1Q8N2C9 162 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 WDR48Q8TAF3 677 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 SFXN2Q96NB2 322 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 CNOT2Q9NZN8 540 aaKnown RBP12.61□□□□□ -0.39
COL2A1-201ENST00000337299 OARD1Q9Y530 152 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 CSNK1G3Q9Y6M4 447 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 CDH10Q9Y6N8 788 aa12.61□□□□□ -0.39
COL2A1-201ENST00000337299 A0A0G2JMP0 313 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 FAAHO00519 579 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 SSX5O60225 188 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 MT-ND5P03915 603 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 RAF1P04049 648 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 SCG5P05408 212 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 AKR1C2P52895 323 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 AKR1C1Q04828 323 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 BIKQ13323 160 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 GPR50Q13585 617 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 OCLNQ16625 522 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 GDF6Q6KF10 455 aaPredicted RBP12.6□□□□□ -0.39
COL2A1-201ENST00000337299 ADGRG2Q8IZP9 1017 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF527Q8NB42 609 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 OR4M2Q8NGB6 313 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 SLC22A8Q8TCC7 542 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 FCAMRQ8WWV6 532 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 S100A16Q96FQ6 103 aaKnown RBP12.6□□□□□ -0.39
COL2A1-201ENST00000337299 C1orf74Q96LT6 269 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 ACTR6Q9GZN1 396 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 REEP4Q9H6H4 257 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 ZFC3H1O60293 1989 aaKnown RBP12.6□□□□□ -0.39
COL2A1-201ENST00000337299 FAM183AA6NL82 134 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 RTCAO00442 366 aaKnown RBP12.6□□□□□ -0.39
COL2A1-201ENST00000337299 C8orf89P0DMQ9 161 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 OR12D1P0DN82 309 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 PCMT1P22061 227 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF763Q0D2J5 394 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 MLLT11Q13015 90 aaPredicted RBP12.6□□□□□ -0.39
COL2A1-201ENST00000337299 DOC2AQ14183 400 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 TMEM69Q5SWH9 247 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 PRAMEF13Q5VWM6 474 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 PGBD3Q8N328 593 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 ACOT12Q8WYK0 555 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 ZBED6CLQ96FA7 236 aaPredicted RBP12.6□□□□□ -0.39
COL2A1-201ENST00000337299 TMEM248Q9NWD8 314 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 P2RX2Q9UBL9 471 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 GNG8Q9UK08 70 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 NUBP2Q9Y5Y2 271 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 C2orf78A6NCI8 922 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 ASPDHA6ND91 283 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 PSMD9O00233 223 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 DSCR3O14972 297 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 FRS3O43559 492 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 OR1F1O43749 312 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 B4GALT3O60512 393 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 S100A2P29034 98 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 NCBP2P52298 156 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL2A1-201ENST00000337299 DUSP6Q16828 381 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 SPIN4Q56A73 249 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 PYHIN1Q6K0P9 492 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 ANKK1Q8NFD2 765 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 TM9SF4Q92544 642 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 SRRQ9GZT4 340 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 GABRQQ9UN88 632 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 AK6Q9Y3D8 172 aaKnown RBP12.6□□□□□ -0.39
COL2A1-201ENST00000337299 AP1M2Q9Y6Q5 423 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 TJP1Q07157 1748 aa12.6□□□□□ -0.39
COL2A1-201ENST00000337299 E7EQ34 232 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 GOSR2O14653 212 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 NUDT14O95848 222 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 EPHX1P07099 455 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 IGFBP1P08833 259 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 HTR2AP28223 471 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 GPR1P46091 355 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 CDONQ4KMG0 1287 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 HES5Q5TA89 166 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 TMEM220Q6QAJ8 160 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF551Q7Z340 670 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 SLC51BQ86UW2 128 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 BEST3Q8N1M1 668 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 ACBD7Q8N6N7 88 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 BBS10Q8TAM1 723 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 SPRYD4Q8WW59 207 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 MAFIPQ8WZ33 124 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 GLI3P10071 1580 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 PLCH1Q4KWH8 1693 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 KRBOX1C9JBD0 128 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 ANHXE9PGG2 379 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 PRKYO43930 277 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 CD2P06729 351 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 PTGER1P34995 402 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 NAA10P41227 235 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 GCGRP47871 477 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 PGDP52209 483 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 RBBP4Q09028 425 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 GK2Q14410 553 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 P2RY14Q15391 338 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 AANATQ16613 207 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 ZBTB37Q5TC79 503 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 KHDRBS2Q5VWX1 349 aaKnown RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 CCDC190Q86UF4 302 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 CIDECQ96AQ7 238 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms