RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 GTF2E2P29084 291 aaKnown RBP16.69■□□□□ 0.26
LRCH3-201ENST00000334859 TIE1P35590 1138 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 SOX9P48436 509 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 LSM11P83369 360 aaKnown RBP eCLIP16.69■□□□□ 0.26
LRCH3-201ENST00000334859 RHAGQ02094 409 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 PRKCDQ05655 676 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 LRRC32Q14392 662 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 TMEM64Q6YI46 380 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 RBM12BQ8IXT5 1001 aaKnown RBP16.69■□□□□ 0.26
LRCH3-201ENST00000334859 POC5Q8NA72 575 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 FAM83FQ8NEG4 500 aaPredicted RBP16.69■□□□□ 0.26
LRCH3-201ENST00000334859 OR2L5Q8NG80 312 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 C16orf58Q96GQ5 468 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 MND1Q9BWT6 205 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 TAPBPLQ9BX59 468 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 NUAK2Q9H093 628 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 IGFLR1Q9H665 355 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 MAN2C1Q9NTJ4 1040 aa16.69■□□□□ 0.26
LRCH3-201ENST00000334859 ISPDA4D126 451 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 TLX2O43763 284 aaPredicted RBP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 PRKYO43930 277 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 KDM1AO60341 852 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 CSO75390 466 aaKnown RBP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 GPX5O75715 221 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 FHP07954 510 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 ALOX12P18054 663 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 TEAD1P28347 426 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 IGFALSP35858 605 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 EIF2B2P49770 351 aaKnown RBP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 ZNF45Q02386 682 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 GNA13Q14344 377 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 SPHARQ15513 63 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 SPANXN2Q5MJ10 180 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 MFSD4BQ5TF39 518 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 ZNF776Q68DI1 518 aaPredicted RBP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 C19orf48Q6RUI8 117 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 ZER1Q7Z7L7 766 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 SFXN5Q8TD22 340 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 TRNT1Q96Q11 434 aaKnown RBP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 HHATLQ9HCP6 504 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 BCL2L10Q9HD36 194 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 PRDM7Q9NQW5 492 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 SLC17A4Q9Y2C5 497 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 LSM2Q9Y333 95 aaKnown RBP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 MYL12BO14950 172 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 EPPINO95925 133 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 TP53P04637 393 aaPredicted RBP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 PEBP1P30086 187 aaKnown RBP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 GDI1P31150 447 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 MEX3DQ86XN8 651 aaKnown RBP16.68■□□□□ 0.26
LRCH3-201ENST00000334859 OR56A1Q8NGH5 318 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 PRRC1Q96M27 445 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 KCNS3Q9BQ31 491 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 CNPPD1Q9BV87 410 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 C1QTNF2Q9BXJ5 285 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 SLC17A9Q9BYT1 436 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 SLC6A17Q9H1V8 727 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 ANKRA2Q9H9E1 313 aa16.68■□□□□ 0.26
LRCH3-201ENST00000334859 MDC1Q14676 2089 aaKnown RBP16.67■□□□□ 0.26
LRCH3-201ENST00000334859 DLGAP3O95886 979 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 LGI1O95970 557 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 AHRP35869 848 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 MC3RP41968 323 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 PCYT1AP49585 367 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 ABATP80404 500 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 PRR5P85299 388 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 GINS1Q14691 196 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 RPE65Q16518 533 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 NDUFA9Q16795 377 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 KIAA1211LQ6NV74 962 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 C11orf74Q86VG3 221 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 MKRN2Q9H000 416 aaKnown RBP16.67■□□□□ 0.26
LRCH3-201ENST00000334859 GIMAP4Q9NUV9 329 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 QPCTLQ9NXS2 382 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 SLC13A4Q9UKG4 626 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 KCNE3Q9Y6H6 103 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 ISM1B1AKI9 464 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 SLC31A1O15431 190 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 ATP6V1G1O75348 118 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 CSNK2A2P19784 350 aaPredicted RBP16.67■□□□□ 0.26
LRCH3-201ENST00000334859 MAGP20916 626 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 COX10Q12887 443 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 C1DQ13901 141 aaKnown RBP16.67■□□□□ 0.26
LRCH3-201ENST00000334859 MRM1Q6IN84 353 aaKnown RBP16.67■□□□□ 0.26
LRCH3-201ENST00000334859 TRIM69Q86WT6 500 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 OR9A2Q8NGT5 310 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 HPS1Q92902 700 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 ITPKCQ96DU7 683 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 LRR1Q96L50 414 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 CEP19Q96LK0 163 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 GPA33Q99795 319 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 MIR1-1HGQ9H1L0 117 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 SP140LQ9H930 580 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 SYNPO2LQ9H987 977 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 RMI1Q9H9A7 625 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 CAB39Q9Y376 341 aaPredicted RBP16.67■□□□□ 0.26
LRCH3-201ENST00000334859 PCDHGA4Q9Y5G9 962 aa16.67■□□□□ 0.26
LRCH3-201ENST00000334859 DOCK8Q8NF50 2099 aa16.66■□□□□ 0.26
LRCH3-201ENST00000334859 ATG2AQ2TAZ0 1938 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms