RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 HSD3B2P26439 372 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 BDKRB1P46663 353 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 RAB8AP61006 207 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 SRP54P61011 504 aaKnown RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 TMEM201Q5SNT2 666 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 C12orf73Q69YU5 71 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 DDX53Q86TM3 631 aaKnown RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 CBARPQ8N350 705 aaPredicted RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 LMNTD1Q8N9Z9 388 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 AP2M1Q96CW1 435 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 RNFT2Q96EX2 444 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 EXTL2Q9UBQ6 330 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 ADAM30Q9UKF2 790 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 DSPPQ9NZW4 1301 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 TEX51A0A1B0GUA7 166 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 FAAHO00519 579 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 IGSF6O95976 241 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 MPC1LP0DKB6 136 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 ACADMP11310 421 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 GJA1P17302 382 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 PREPP48147 710 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 PER3P56645 1201 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 C21orf58P58505 322 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 SP140Q13342 867 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 ADAM15Q13444 863 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 MRPL58Q14197 206 aaKnown RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 KLHL12Q53G59 568 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 PGBD2Q6P3X8 592 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 TPRG1Q6ZUI0 275 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 CAMKMTQ7Z624 323 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 OR4M2Q8NGB6 313 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 WDR48Q8TAF3 677 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 SLC7A13Q8TCU3 470 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 ZC3HAV1LQ96H79 300 aaKnown RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF582Q96NG8 517 aaPredicted RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 OR4K3Q96R72 315 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 C17orf62Q9BQA9 187 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 DPCDQ9BVM2 203 aaPredicted RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 C1QTNF7Q9BXJ2 289 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 ABCG5Q9H222 651 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 CLEC4MQ9H2X3 399 aaPredicted RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 BRF2Q9HAW0 419 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 SLC35C2Q9NQQ7 365 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 KLHL42Q9P2K6 505 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 SERTM1A2A2V5 107 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 PIPSLA2A3N6 862 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 CD8B2A6NJW9 211 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 VNN2O95498 520 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 DHFRP00374 187 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 CD8BP10966 210 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 GIPRP48546 466 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 CSNK1DP48730 415 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 PCBP3P57721 371 aaKnown RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 MEF2AQ02078 507 aaPredicted RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 EEF1A2Q05639 463 aaKnown RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 RPA4Q13156 261 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 INSL4Q14641 139 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 OCLNQ16625 522 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 CDKN3Q16667 212 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 IDNKQ5T6J7 187 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 SHEQ5VZ18 495 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 ACSM5Q6NUN0 579 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 TEX261Q6UWH6 196 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 HMGN2P46Q86SG4 172 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 FBXO22Q8NEZ5 403 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 SCAMP4Q969E2 229 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 TMEM159Q96B96 161 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 C11orf24Q96F05 449 aaPredicted RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 CWH43Q9H720 699 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 FOLH1BQ9HBA9 442 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 MCCC2Q9HCC0 563 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 TAS2R7Q9NYW3 318 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 STOX2Q9P2F5 926 aaPredicted RBP13□□□□□ -0.33
SYNE3-201ENST00000334258 SEC14L3Q9UDX4 400 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 ATP6V1HQ9UI12 483 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 CDH10Q9Y6N8 788 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 U3KQ87 197 aa13□□□□□ -0.33
SYNE3-201ENST00000334258 A0A0A6YYJ9 748 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 ARRDC5A6NEK1 342 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 CATP04040 527 aaKnown RBP12.99□□□□□ -0.33
SYNE3-201ENST00000334258 PBLDP30039 288 aaPredicted RBP12.99□□□□□ -0.33
SYNE3-201ENST00000334258 SOX18P35713 384 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 TALDO1P37837 337 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 ATP12AP54707 1039 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF33BQ06732 778 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 ZMYND11Q15326 602 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 PLEKHS1Q5SXH7 462 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 PLEKHM3Q6ZWE6 761 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 SAMD14Q8IZD0 417 aaPredicted RBP12.99□□□□□ -0.33
SYNE3-201ENST00000334258 MMP21Q8N119 569 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 SLC38A5Q8WUX1 472 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 NEIL2Q969S2 332 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 TMEM19Q96HH6 336 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 MED18Q9BUE0 208 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 SLC16A5O15375 505 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 FURINP09958 794 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 SSTR2P30874 369 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 RAB14P61106 215 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms