RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TOR1AIP1Q5JTV8 583 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 LETMD1Q6P1Q0 360 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 NXPE4Q6UWF7 544 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 RASSF6Q6ZTQ3 369 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 TIGD4Q8IY51 512 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 MEIOBQ8N635 442 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 GOLM1Q8NBJ4 401 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 OR52L1Q8NGH7 329 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 SLC37A2Q8TED4 501 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 USP7Q93009 1102 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 UBXN10Q96LJ8 280 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 BEX1Q9HBH7 125 aa11.2□□□□□ -0.62
HDAC6-201ENST00000334136 ZSCAN5BA6NJL1 495 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 MATN4O95460 622 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 JUPP14923 745 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 GGT1P19440 569 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 MPLP40238 635 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 SNRPD2P62316 118 aaKnown RBP11.19□□□□□ -0.62
HDAC6-201ENST00000334136 KIR2DS3Q14952 304 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 UGT8Q16880 541 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 CRB2Q5IJ48 1285 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 C10orf62Q5T681 223 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-201ENST00000334136 MLIPQ5VWP3 458 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 ELMOD2Q8IZ81 293 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 CHDHQ8NE62 594 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-201ENST00000334136 KLHL6Q8WZ60 621 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 FEVQ99581 238 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 SLC35A5Q9BS91 424 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 KCNH6Q9H252 994 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 SLC23A2Q9UGH3 650 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 GREB1Q4ZG55 1949 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 TRBC2A0A5B9 178 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 ARNTLO00327 626 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 PCDH7O60245 1069 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 CH25HO95992 272 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 HPGDP15428 266 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 DCKP27707 260 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 PCDH1Q08174 1060 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 RCAN2Q14206 197 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 CXXC5Q7LFL8 322 aaKnown RBP11.19□□□□□ -0.62
HDAC6-201ENST00000334136 IQCHQ86VS3 1027 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 FUNDC1Q8IVP5 155 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 TCEANCQ8N8B7 351 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 BMFQ96LC9 184 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 FARSBQ9NSD9 589 aaKnown RBP11.19□□□□□ -0.62
HDAC6-201ENST00000334136 COQ3Q9NZJ6 369 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 ENPP5Q9UJA9 477 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 FBXO4Q9UKT5 387 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 GPR179Q6PRD1 2367 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 CACNA1EQ15878 2313 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 SEC16AO15027 2179 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 SLC5A10A0PJK1 596 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 M0R129 80 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 YY2O15391 372 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 MPZL2O60487 215 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 UBXN7O94888 489 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 TEAD1P28347 426 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 RCVRNP35243 200 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 XKP51811 444 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 GNG2P59768 71 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 BTN3A2P78410 334 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 DPY19L1Q2PZI1 675 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 LIPKQ5VXJ0 399 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 KANK2Q63ZY3 851 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 NFKBIDQ8NI38 313 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 CHPT1Q8WUD6 406 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 L3HYPDHQ96EM0 354 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 KCTD7Q96MP8 289 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 ATOH8Q96SQ7 321 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 TMEM184CQ9NVA4 438 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 SLC17A4Q9Y2C5 497 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 POFUT2Q9Y2G5 429 aa11.19□□□□□ -0.62
HDAC6-201ENST00000334136 NLRC5Q86WI3 1866 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 TCF20Q9UGU0 1960 aaKnown RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 C9J4A7 227 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 ZNF195O14628 629 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 HPRP00739 348 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 RLN1P04808 185 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 VMACQ2NL98 169 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 SPATS1Q496A3 300 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 FAM20CQ8IXL6 584 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 C9orf43Q8TAL5 461 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 USP36Q9P275 1121 aaKnown RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 EIF3KQ9UBQ5 218 aaKnown RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 PCTPQ9UKL6 214 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 A0A096LPI6 279 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 A6NL46 340 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 C21orf33P30042 268 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 TRIM23P36406 574 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 KCNC1P48547 511 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 GALNT1Q10472 559 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 HNRNPA0Q13151 305 aaKnown RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 LMNTD1Q8N9Z9 388 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 PATE1Q8WXA2 126 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 RBM18Q96H35 190 aaKnown RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 SPATA5L1Q9BVQ7 753 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 RPS6KB2Q9UBS0 482 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 TRPS1Q9UHF7 1281 aa11.18□□□□□ -0.62
HDAC6-201ENST00000334136 RPL36Q9Y3U8 105 aaKnown RBP11.18□□□□□ -0.62
HDAC6-201ENST00000334136 PCDHB14Q9Y5E9 798 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms