RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 INSL4Q14641 139 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 FAM214AQ32MH5 1076 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 IKBIPQ70UQ0 350 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 RAB43Q86YS6 212 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 PHOSPHO2Q8TCD6 241 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 KLK6Q92876 244 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 DIRAS2Q96HU8 199 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 ZFYVE19Q96K21 471 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 DCLRE1CQ96SD1 692 aaKnown RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 FUZQ9BT04 418 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 PRRG3Q9BZD7 231 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 C11orf54Q9H0W9 315 aaPredicted RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 OR52A5Q9H2C5 316 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 MOV10Q9HCE1 1003 aaKnown RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 NDOR1Q9UHB4 597 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 NUFIP1Q9UHK0 495 aaKnown RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 HCN2Q9UL51 889 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 A0A0B4J293 547 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 PRRT4C9JH25 899 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 HOXC11O43248 304 aaPredicted RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 LATO43561 262 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 CSF3P09919 207 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 NR2F1P10589 423 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 MYOGP15173 224 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 PCBP4P57723 403 aaKnown RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 ZFP69Q49AA0 526 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 CLEC12AQ5QGZ9 265 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 MEDAGQ5VYS4 303 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 KIAA0907Q7Z7F0 614 aaPredicted RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 C17orf64Q86WR6 236 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 KIF18BQ86Y91 864 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 C7orf61Q8IZ16 206 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 KRT78Q8N1N4 520 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 PROKR2Q8NFJ6 384 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 CHAC2Q8WUX2 184 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 HERVK_113Q902F9 699 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 SMG7Q92540 1137 aaKnown RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 SLC9A6Q92581 669 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 TFGQ92734 400 aaPredicted RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 SLC25A46Q96AG3 418 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 RNF31Q96EP0 1072 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 C1GALT1C1Q96EU7 318 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 ZNF582Q96NG8 517 aaPredicted RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 MTIF3Q9H2K0 278 aaKnown RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 RANGRFQ9HD47 186 aaPredicted RBP11.63□□□□□ -0.55
VPS33B-201ENST00000333371 FBXW2Q9UKT8 454 aa11.63□□□□□ -0.55
VPS33B-201ENST00000333371 NCR1O76036 304 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 CH25HO95992 272 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 HOXB3P14651 431 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 GPC1P35052 558 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 BUD31P41223 144 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 GIPRP48546 466 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 MLLT11Q13015 90 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 CAMK1Q14012 370 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 SNAPC1Q16533 368 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 GLYR1Q49A26 553 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 ADCK2Q7Z695 626 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 UBE3DQ7Z6J8 389 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 TP53I13Q8NBR0 393 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 CREB3L4Q8TEY5 395 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 DHRS1Q96LJ7 313 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 C17orf62Q9BQA9 187 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 FNDC11Q9BVV2 318 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 LGR4Q9BXB1 951 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 DKK3Q9UBP4 350 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 KCNE3Q9Y6H6 103 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 FABP12A6NFH5 140 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 OR1F1O43749 312 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 TMCC2O75069 709 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 C8orf89P0DMQ9 161 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 S100A1P23297 94 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 DUSP2Q05923 314 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 C1DQ13901 141 aaKnown RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 VASH1Q7L8A9 365 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 OR2L2Q8NH16 312 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 WFIKKN2Q8TEU8 576 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 RAD51AP1Q96B01 352 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 ZG16BQ96DA0 208 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 TEFMQ96QE5 360 aaKnown RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 AICDAQ9GZX7 198 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 GLIPR2Q9H4G4 154 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 PAQR5Q9NXK6 330 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 CNIH4Q9P003 139 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 IL20RAQ9UHF4 553 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 PCDHGB2Q9Y5G2 931 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 ERAL1O75616 437 aaKnown RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 LALBAP00709 142 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 CHRM4P08173 479 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 ITGB7P26010 798 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 VIPR2P41587 438 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 SLC6A11P48066 632 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 GAS1P54826 345 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 DMPKQ09013 629 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 FUT5Q11128 374 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 CRTC2Q53ET0 693 aaPredicted RBP11.62□□□□□ -0.55
VPS33B-201ENST00000333371 LCTLQ6UWM7 567 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 LHFPL3Q86UP9 236 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 NRSN1Q8IZ57 195 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 TBC1D19Q8N5T2 526 aa11.62□□□□□ -0.55
VPS33B-201ENST00000333371 C12orf76Q8N812 135 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms