RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CNIH4Q9P003 139 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 RIMS3Q9UJD0 308 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 NPC1O15118 1278 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 PRODHO43272 600 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 DUX1O43812 170 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 SOX30O94993 753 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 NCS1P62166 190 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.35□□□□□ -0.43
VSTM4-202ENST00000332853 ACOT4Q8N9L9 421 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 TOE1Q96GM8 510 aaKnown RBP12.35□□□□□ -0.43
VSTM4-202ENST00000332853 ACTRT3Q9BYD9 372 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 ANKRD60Q9BZ19 345 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 ZBTB20Q9HC78 741 aaPredicted RBP12.35□□□□□ -0.43
VSTM4-202ENST00000332853 UBAP1Q9NZ09 502 aa12.35□□□□□ -0.43
VSTM4-202ENST00000332853 COL11A2P13942 1736 aaPredicted RBP12.35□□□□□ -0.43
VSTM4-202ENST00000332853 J3KTA2 159 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 MAN2B1O00754 1011 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 HTR1AP08908 422 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 NUDT7P0C024 238 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 MAOBP27338 520 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 CDKN2CP42773 168 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 DCDC1P59894 354 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 CD83Q01151 205 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 PLCXD2Q0VAA5 305 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 CPZQ66K79 652 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 NRMQ8IXM6 262 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 SPPL3Q8TCT6 385 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 HSPA12BQ96MM6 686 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 C14orf119Q9NWQ9 140 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 SMAD9O15198 467 aaKnown RBP12.34□□□□□ -0.43
VSTM4-202ENST00000332853 PIM1P11309 404 aaPredicted RBP12.34□□□□□ -0.43
VSTM4-202ENST00000332853 PCGF2P35227 344 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 ZNF829Q3KNS6 432 aaPredicted RBP12.34□□□□□ -0.43
VSTM4-202ENST00000332853 JAGN1Q8N5M9 183 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 CREB3L4Q8TEY5 395 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 KCNN1Q92952 543 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 CDCA3Q99618 268 aaPredicted RBP12.34□□□□□ -0.43
VSTM4-202ENST00000332853 MGLLQ99685 303 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 SRA1Q9HD15 236 aaKnown RBP12.34□□□□□ -0.43
VSTM4-202ENST00000332853 ENPP4Q9Y6X5 453 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 PRRC2BQ5JSZ5 2229 aaKnown RBP12.34□□□□□ -0.43
VSTM4-202ENST00000332853 ZNF879B4DU55 563 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 LILRB3O75022 631 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 ACVR1BP36896 505 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 TSPAN5P62079 268 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 PLGLB1Q02325 96 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 PUS10Q3MIT2 529 aaKnown RBP12.34□□□□□ -0.43
VSTM4-202ENST00000332853 CCSMST1Q4G0I0 132 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 SBSNQ6UWP8 590 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 KLBQ86Z14 1044 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 LGALS12Q96DT0 336 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 SLC41A3Q96GZ6 507 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 INSM2Q96T92 566 aaPredicted RBP12.34□□□□□ -0.43
VSTM4-202ENST00000332853 ORAI3Q9BRQ5 295 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 RMI1Q9H9A7 625 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 TM7SF3Q9NS93 570 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 H7C0S8 307 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 GKN3PP0CG01 181 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 DRD1P21728 446 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 UGT2A3Q6UWM9 527 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 OR4K5Q8NGD3 323 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 DOCK5Q9H7D0 1870 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 A0A1W2PQ72 361 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 ARNTLO00327 626 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 KIAA0513O60268 411 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 RDH16O75452 317 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 CSF2P04141 144 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 SPARCP09486 303 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 IMPA1P29218 277 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 MSLNLQ96KJ4 702 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 TEX37Q96LM6 180 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 PREBQ9HCU5 417 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 CHMP1AQ9HD42 196 aaPredicted RBP12.34□□□□□ -0.43
VSTM4-202ENST00000332853 PRSS16Q9NQE7 514 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
VSTM4-202ENST00000332853 A0A1W2PPL8 197 aa12.33□□□□□ -0.43
VSTM4-202ENST00000332853 TUBA1CQ9BQE3 449 aa12.33□□□□□ -0.43
VSTM4-202ENST00000332853 SAGE1Q9NXZ1 904 aa12.33□□□□□ -0.43
VSTM4-202ENST00000332853 A0A0G2JPF8 293 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 LINC01553A4QN01 128 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 HNRNPCL3B7ZW38 293 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 IGLV3-25P01717 112 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 HNRNPCL4P0DMR1 293 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 HK3P52790 923 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 HBA1P69905 142 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 HSF2Q03933 536 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 CDK5R2Q13319 367 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 PAMR1Q6UXH9 720 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 Q6ZSR9 355 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 SERPINA11Q86U17 422 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 TMEFF1Q8IYR6 380 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 TOMM5Q8N4H5 51 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 WDR20Q8TBZ3 569 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 FTSJ1Q9UET6 329 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 SLC7A7Q9UM01 511 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 TMEM202A6NGA9 273 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 CTBSQ01459 385 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 ADAM15Q13444 863 aa12.33□□□□□ -0.44
VSTM4-202ENST00000332853 CARD17Q5XLA6 110 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms