RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 NUP43Q8NFH3 380 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 OR9A2Q8NGT5 310 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 OR5AK3PQ8NH89 298 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 MIPOL1Q8TD10 442 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 SLC26A7Q8TE54 656 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 MS4A4EQ96PG1 132 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 DDA1Q9BW61 102 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 ALOXE3Q9BYJ1 711 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 PCDHAC1Q9H158 963 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 IKZF5Q9H5V7 419 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 NXT1Q9UKK6 140 aaKnown RBP16.88■□□□□ 0.29
SYNE4-201ENST00000324444 LOXL2Q9Y4K0 774 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 PCDHGB3Q9Y5G1 929 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 TTC36A6NLP5 189 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 CXCR6O00574 342 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 ARPC2O15144 300 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 ASNA1O43681 348 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 ENTPD5O75356 428 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 IFNA14P01570 189 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 GPIP06744 558 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 JMJD7P0C870 316 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 MATN1P21941 496 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 RORAP35398 523 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.87■□□□□ 0.29
SYNE4-201ENST00000324444 C1orf189Q5VU69 101 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 TMEM107Q6UX40 140 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 OVCH1Q7RTY7 1134 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 SZRD1Q7Z422 152 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 GALNT12Q8IXK2 581 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 OR2L13Q8N349 312 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 TMEM52Q8NDY8 209 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 RNF145Q96MT1 663 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 PTCHD1Q96NR3 888 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 SLC46A1Q96NT5 459 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 TAAR9Q96RI9 348 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 TRIM8Q9BZR9 551 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 TRIM4Q9C037 500 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 B3GNT4Q9C0J1 378 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 LANCL2Q9NS86 450 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 IFT80Q9P2H3 777 aaPredicted RBP16.87■□□□□ 0.29
SYNE4-201ENST00000324444 EGFL7Q9UHF1 273 aa16.87■□□□□ 0.29
SYNE4-201ENST00000324444 C19orf53Q9UNZ5 99 aaPredicted RBP16.87■□□□□ 0.29
SYNE4-201ENST00000324444 TMEM184BQ9Y519 407 aaPredicted RBP16.87■□□□□ 0.29
SYNE4-201ENST00000324444 A8MUI8 341 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 MEN1O00255 615 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 SORBS2O94875 1100 aaKnown RBP16.86■□□□□ 0.29
SYNE4-201ENST00000324444 PSMG1O95456 288 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 PCGF2P35227 344 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 MSX2P35548 267 aaPredicted RBP16.86■□□□□ 0.29
SYNE4-201ENST00000324444 MC3RP41968 323 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 OR4D2P58180 307 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 TLE3Q04726 772 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 CCNIQ14094 377 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 ELOAQ14241 798 aaKnown RBP16.86■□□□□ 0.29
SYNE4-201ENST00000324444 SYT16Q17RD7 645 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 ZNF750Q32MQ0 723 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 MINDY4Q4G0A6 757 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 ZNF628Q5EBL2 1059 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 ATAD3BQ5T9A4 648 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 MFSD4BQ5TF39 518 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 IRAK1BP1Q5VVH5 260 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 PLPP5Q8NEB5 264 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 PNPT1Q8TCS8 783 aaKnown RBP16.86■□□□□ 0.29
SYNE4-201ENST00000324444 RIT1Q92963 219 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 NCLNQ969V3 563 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 FAM162AQ96A26 154 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 DUS3LQ96G46 650 aaKnown RBP16.86■□□□□ 0.29
SYNE4-201ENST00000324444 ART5Q96L15 291 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 ACTRT3Q9BYD9 372 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 CHST8Q9H2A9 424 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 SLC26A1Q9H2B4 701 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 PIF1Q9H611 641 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 GPN3Q9UHW5 284 aaPredicted RBP16.86■□□□□ 0.29
SYNE4-201ENST00000324444 ACSL6Q9UKU0 697 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 ANGPT4Q9Y264 503 aa16.86■□□□□ 0.29
SYNE4-201ENST00000324444 SEC16AO15027 2179 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 C5orf58C9J3I9 102 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 C9J4A7 227 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 PCDH17O14917 1159 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 PLD2O14939 933 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 TNFRSF21O75509 655 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 TNFSF15O95150 251 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 ATP6V1G2O95670 118 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 IFNA16P05015 189 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 C8BP07358 591 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 CCL4P13236 92 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 PSMA4P25789 261 aaKnown RBP16.85■□□□□ 0.29
SYNE4-201ENST00000324444 MVDP53602 400 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 PRKAG1P54619 331 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 PRICKLE4Q2TBC4 344 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 SOWAHCQ53LP3 525 aaPredicted RBP16.85■□□□□ 0.29
SYNE4-201ENST00000324444 PRAMEF17Q5VTA0 474 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 ZC3H7AQ8IWR0 971 aaKnown RBP16.85■□□□□ 0.29
SYNE4-201ENST00000324444 ZZZ3Q8IYH5 903 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 VWA5B2Q8N398 1253 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 HIPK4Q8NE63 616 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 KCNE4Q8WWG9 221 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 FIG4Q92562 907 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 CTHRC1Q96CG8 243 aa16.85■□□□□ 0.29
SYNE4-201ENST00000324444 UGT2B28Q9BY64 529 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms