RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 A0A1W2PR48 441 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 GIPRP48546 466 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 OR2G6Q5TZ20 316 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 SMARCD2Q92925 531 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 CHFRQ96EP1 664 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 TAPBPLQ9BX59 468 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 PLA2G12AQ9BZM1 189 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 TOR4AQ9NXH8 423 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 CEP290O15078 2479 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 PLD2O14939 933 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 OXSR1O95747 527 aaPredicted RBP16.42■□□□□ 0.22
COL9A1-201ENST00000320755 CH25HO95992 272 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 ERGP11308 486 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 ALDH6A1Q02252 535 aaKnown RBP16.42■□□□□ 0.22
COL9A1-201ENST00000320755 IRF4Q15306 451 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 ATAT1Q5SQI0 421 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 C12orf73Q69YU5 71 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 TANGO2Q6ICL3 276 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 LAX1Q8IWV1 398 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 RAB42Q8N4Z0 105 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 DOK4Q8TEW6 326 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 CREB3L4Q8TEY5 395 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 RASSF5Q8WWW0 418 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 SLC9A6Q92581 669 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 MND1Q9BWT6 205 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 SMURF1Q9HCE7 757 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 MRPS30Q9NP92 439 aaKnown RBP16.42■□□□□ 0.22
COL9A1-201ENST00000320755 ACSS1Q9NUB1 689 aaPredicted RBP16.42■□□□□ 0.22
COL9A1-201ENST00000320755 CNIH4Q9P003 139 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 CDRT1O95170 752 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 EPPINO95925 133 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 APOA1P02647 267 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 CERS1P27544 350 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 ETV5P41161 510 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 PCYT1AP49585 367 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 ETV1P50549 477 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 SMIM11AP58511 58 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 DEFA1P59665 94 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 DEFA3P59666 94 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 RHAGQ02094 409 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 CDC20Q12834 499 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 TAB1Q15750 504 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 MFSD4BQ5TF39 518 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 KAT2AQ92830 837 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 COL26A1Q96A83 441 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 CNRIP1Q96F85 164 aaPredicted RBP16.42■□□□□ 0.22
COL9A1-201ENST00000320755 FCRL4Q96PJ5 515 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 FAIM2Q9BWQ8 316 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 TIGARQ9NQ88 270 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 IL20RAQ9UHF4 553 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 MKLN1Q9UL63 735 aa16.42■□□□□ 0.22
COL9A1-201ENST00000320755 LSM2Q9Y333 95 aaKnown RBP16.42■□□□□ 0.22
COL9A1-201ENST00000320755 SPIN1Q9Y657 262 aaPredicted RBP16.42■□□□□ 0.22
COL9A1-201ENST00000320755 TRBV23OR9-2A0A075B6M9 112 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 A0A0A6YYD5 115 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 CPSF4LA6NMK7 179 aaKnown RBP16.41■□□□□ 0.22
COL9A1-201ENST00000320755 GRXCR1A8MXD5 290 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 TP53P04637 393 aaPredicted RBP16.41■□□□□ 0.22
COL9A1-201ENST00000320755 CLEC2LP0C7M8 214 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 HSD17B2P37059 387 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 CRYBB2P43320 205 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 C1DQ13901 141 aaKnown RBP16.41■□□□□ 0.22
COL9A1-201ENST00000320755 NCF4Q15080 339 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 PDGFRLQ15198 375 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 SYT14P1Q58G82 188 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 ZFP41Q8N8Y5 198 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 ACOT4Q8N9L9 421 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 SDHCQ99643 169 aaPredicted RBP16.41■□□□□ 0.22
COL9A1-201ENST00000320755 HDAC8Q9BY41 377 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 SPHK1Q9NYA1 384 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 MUTYHQ9UIF7 546 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 UGT2A1Q9Y4X1 527 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 MAN2B1O00754 1011 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 ASNA1O43681 348 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 KAT7O95251 611 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 FRKP42685 505 aaPredicted RBP16.41■□□□□ 0.22
COL9A1-201ENST00000320755 NR4A2P43354 598 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 RAB28P51157 221 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 SEC13P55735 322 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 FGL2Q14314 439 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 TMEM240Q5SV17 173 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 C22orf42Q6IC83 251 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 C19orf48Q6RUI8 117 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 VITQ6UXI7 678 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 CCDC190Q86UF4 302 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 FBXL6Q8N531 539 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 NANOGP1Q8N7R0 232 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 Q8N9G6 341 aaPredicted RBP16.41■□□□□ 0.22
COL9A1-201ENST00000320755 MAN2C1Q9NTJ4 1040 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 CRNNQ9UBG3 495 aaPredicted RBP16.41■□□□□ 0.22
COL9A1-201ENST00000320755 SSR3Q9UNL2 185 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 NTNG1Q9Y2I2 539 aa16.41■□□□□ 0.22
COL9A1-201ENST00000320755 WBP11Q9Y2W2 641 aaKnown RBP16.41■□□□□ 0.22
COL9A1-201ENST00000320755 PIPP12273 146 aaPredicted RBP16.4■□□□□ 0.22
COL9A1-201ENST00000320755 DDX5P17844 614 aaKnown RBP16.4■□□□□ 0.22
COL9A1-201ENST00000320755 AVPR1BP47901 424 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 TAS2R41P59536 307 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 RUNX1T1Q06455 604 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 FUT5Q11128 374 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 CST6Q15828 149 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms