RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 FBXO9Q9UK97 447 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-201ENST00000319854 RNASET2O00584 256 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 PRAMEF10O60809 474 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 NOS1APO75052 506 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 RB1P06400 928 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 OPRD1P41143 372 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 PDGFRLQ15198 375 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 GLYR1Q49A26 553 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 ESCO2Q56NI9 601 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 SLC35F1Q5T1Q4 408 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 SAXO2Q658L1 398 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 VITQ6UXI7 678 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 MSANTD1Q6ZTZ1 278 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 LRRTM4Q86VH4 590 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 B3GNT4Q9C0J1 378 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 CXorf36Q9H7Y0 433 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 CTPS2Q9NRF8 586 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 NFKBIL1Q9UBC1 381 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 CLEC2DQ9UHP7 191 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 PRAMEF25A6NGN4 478 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 SHOXO15266 292 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 OR2B3O76000 313 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 BCHEP06276 602 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 PSKH1P11801 424 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 DRD3P35462 400 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 OLR1P78380 273 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 ALDH6A1Q02252 535 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 ASAH1Q13510 395 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 EXOC3L2Q2M3D2 409 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 ZNF658BQ4V348 819 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 TOR2AQ5JU69 321 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 PIP5KL1Q5T9C9 394 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 CEACAM20Q6UY09 585 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 LRRC56Q8IYG6 542 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 WDR36Q8NI36 951 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 CRELD1Q96HD1 420 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 C17orf62Q9BQA9 187 aa14.71□□□□□ -0.05
SHROOM1-201ENST00000319854 PCDH17O14917 1159 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 CLEC2LP0C7M8 214 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 GDI1P31150 447 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 SELENOWP63302 87 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 TMEM31Q5JXX7 168 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 ZNF367Q7RTV3 350 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 PDZD3Q86UT5 571 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 ADGRF3Q8IZF5 1079 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 TCTE3Q8IZS6 198 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 FBXL6Q8N531 539 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 OR14C36Q8NHC7 312 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 ARMC5Q96C12 935 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 EPYCQ99645 322 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 TEX10Q9NXF1 929 aaPredicted RBP14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 HSPB11Q9Y547 144 aa14.71□□□□□ -0.06
SHROOM1-201ENST00000319854 NPIPB8E9PQR5 432 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 LCMT2O60294 686 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 KELP23276 732 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 GPC1P35052 558 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 NUDT1P36639 197 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 TAS2R38P59533 333 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 TNK1Q13470 666 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 RUNX3Q13761 415 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 VEZF1Q14119 521 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 TATDN3Q17R31 274 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 DCUN1D3Q8IWE4 304 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 DTX3Q8N9I9 347 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 OR10G2Q8NGC3 310 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 BHLHE41Q9C0J9 482 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 DUSP12Q9UNI6 340 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 STON1Q9Y6Q2 735 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 SCN2AQ99250 2005 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 LINC01565O15544 149 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 GPR37L1O60883 481 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 ERAL1O75616 437 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 CHRM5P08912 532 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 DDX5P17844 614 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 FAM71E1Q6IPT2 247 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 SLC9B2Q86UD5 537 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 LIX1LQ8IVB5 337 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 LAS2Q8IYD9 372 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 LGI4Q8N135 537 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 KRT78Q8N1N4 520 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 ZNF514Q96K75 400 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 CHST8Q9H2A9 424 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 WDR26Q9H7D7 661 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 ALG5Q9Y673 324 aa14.7□□□□□ -0.06
SHROOM1-201ENST00000319854 TBX6O95947 436 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 HOXB6P17509 224 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 POLR2CP19387 275 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 ALAS2P22557 587 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 PTX3P26022 381 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 PCGF2P35227 344 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 CRYBB2P43320 205 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 ZNF750Q32MQ0 723 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 TRIM40Q6P9F5 258 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 DGLUCYQ7Z3D6 616 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 RERGLQ9H628 205 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 ANKRA2Q9H9E1 313 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 CA5BQ9Y2D0 317 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 PCDHGB3Q9Y5G1 929 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 CLCA3PQ9Y6N3 262 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms