RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 RNF4P78317 190 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 BST1Q10588 318 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 KIAA0040Q15053 153 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 PDCD2Q16342 344 aaPredicted RBP11.22□□□□□ -0.61
ABCD3-201ENST00000315713 C3AR1Q16581 482 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 RFTN2Q52LD8 501 aaPredicted RBP11.22□□□□□ -0.61
ABCD3-201ENST00000315713 TTMPQ5BVD1 217 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 ATG16L1Q676U5 607 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 MTFR2Q6P444 385 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 NCCRP1Q6ZVX7 275 aaPredicted RBP11.22□□□□□ -0.61
ABCD3-201ENST00000315713 IKBIPQ70UQ0 350 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 SLC29A4Q7RTT9 530 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 KIRREL3Q8IZU9 778 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 ZNF295-AS1Q8N0V1 137 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 LRRC25Q8N386 305 aaPredicted RBP11.22□□□□□ -0.61
ABCD3-201ENST00000315713 HORMAD2Q8N7B1 307 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 OR8K3Q8NH51 312 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 DNAJB8Q8NHS0 232 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 TUBGCP3Q96CW5 907 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 CCT7Q99832 543 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 C20orf27Q9GZN8 174 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 TSPAN10Q9H1Z9 355 aaPredicted RBP11.22□□□□□ -0.61
ABCD3-201ENST00000315713 LIN28AQ9H9Z2 209 aaKnown RBP11.22□□□□□ -0.61
ABCD3-201ENST00000315713 CXorf21Q9HAI6 301 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 LRFN1Q9P244 771 aa11.22□□□□□ -0.61
ABCD3-201ENST00000315713 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.22□□□□□ -0.61
ABCD3-201ENST00000315713 WBP11Q9Y2W2 641 aaKnown RBP11.22□□□□□ -0.61
ABCD3-201ENST00000315713 HMGB1P1B2RPK0 211 aaPredicted RBP11.21□□□□□ -0.61
ABCD3-201ENST00000315713 WWP2O00308 870 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 OR2J2O76002 312 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 IGKV3-11P04433 115 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 ATP1B1P05026 303 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 CD46P15529 392 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 CD96P40200 585 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 SSR4P51571 173 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 HK2P52789 917 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 CASP6P55212 293 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 KRTAP10-9P60411 292 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 RBPJQ06330 500 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 OR1C1Q15619 314 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.21□□□□□ -0.61
ABCD3-201ENST00000315713 XKR7Q5GH72 579 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 ZNF766Q5HY98 468 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 SPINK14Q6IE38 97 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 FAM71E1Q6IPT2 247 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 C16orf47Q6ZP98 133 aaPredicted RBP11.21□□□□□ -0.61
ABCD3-201ENST00000315713 CCDC116Q8IYX3 515 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 SAMD14Q8IZD0 417 aaPredicted RBP11.21□□□□□ -0.61
ABCD3-201ENST00000315713 FNDC5Q8NAU1 212 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 RAB3IL1Q8TBN0 382 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 GFM2Q969S9 779 aaKnown RBP11.21□□□□□ -0.61
ABCD3-201ENST00000315713 CNRIP1Q96F85 164 aaPredicted RBP11.21□□□□□ -0.61
ABCD3-201ENST00000315713 MAGED4Q96JG8 741 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 PPP1R36Q96LQ0 422 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 C3orf30Q96M34 536 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 TSSK3Q96PN8 268 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 BBS4Q96RK4 519 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 GAL3ST4Q96RP7 486 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 SORT1Q99523 831 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 SH3GL2Q99962 352 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 MANSC1Q9H8J5 431 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 SLC35C2Q9NQQ7 365 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 THAP1Q9NVV9 213 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 EHD3Q9NZN3 535 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 MYOTQ9UBF9 498 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 GIMAP2Q9UG22 337 aa11.21□□□□□ -0.61
ABCD3-201ENST00000315713 YARS2Q9Y2Z4 477 aaKnown RBP11.21□□□□□ -0.61
ABCD3-201ENST00000315713 UQCRHLA0A096LP55 91 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 OR6C76A6NM76 312 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 A8MVJ9 347 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 CDK2AP1O14519 115 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 LRATO95237 230 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 CT62P0C5K7 136 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 SDC1P18827 310 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 TACR1P25103 407 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 SSTR4P31391 388 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 PTGER1P34995 402 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 HLCSP50747 726 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 SLC37A1P57057 533 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 PRICKLE4Q2TBC4 344 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 ZNF468Q5VIY5 522 aaPredicted RBP11.2□□□□□ -0.62
ABCD3-201ENST00000315713 HLA-DQA1Q5Y7H0 255 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 XKRXQ6PP77 449 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 FAM111BQ6SJ93 734 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 C9orf40Q8IXQ3 194 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 ARMC10Q8N2F6 343 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 VWA5B2Q8N398 1253 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 ADCY4Q8NFM4 1077 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 CLHC1Q8NHS4 586 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 NUBPLQ8TB37 319 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 DYDC1Q8WWB3 177 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 ASB15Q8WXK1 588 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 TMEM125Q96AQ2 219 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 EGLN2Q96KS0 407 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 FCRL1Q96LA6 429 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 ZNF681Q96N22 645 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 SIGLEC12Q96PQ1 595 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 C1orf50Q9BV19 199 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 HES7Q9BYE0 225 aa11.2□□□□□ -0.62
ABCD3-201ENST00000315713 OR10A5Q9H207 317 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms