RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 TRAPPC6AO75865 159 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 GLI4P10075 376 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 PYGBP11216 843 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 HSD3B1P14060 373 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 CSNK2A2P19784 350 aaPredicted RBP17.91■□□□□ 0.46
LIME1-201ENST00000309546 HSD3B2P26439 372 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 HTR6P50406 440 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 RPP38P78345 283 aaKnown RBP17.91■□□□□ 0.46
LIME1-201ENST00000309546 TLE4Q04727 773 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 LTB4RQ15722 352 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 PRICKLE4Q2TBC4 344 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 RTL6Q6ICC9 239 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 SLC22A9Q8IVM8 553 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 ITPAQ9BY32 194 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 NXF5Q9H1B4 397 aaKnown RBP17.91■□□□□ 0.46
LIME1-201ENST00000309546 NPDC1Q9NQX5 325 aaPredicted RBP17.91■□□□□ 0.46
LIME1-201ENST00000309546 QPCTLQ9NXS2 382 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 UTS2RQ9UKP6 389 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 ZNF780BQ9Y6R6 833 aa17.91■□□□□ 0.46
LIME1-201ENST00000309546 C15orf38-AP3S2A0A0A6YYH1 394 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 PCDH7O60245 1069 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 TRIM3O75382 744 aaPredicted RBP17.9■□□□□ 0.46
LIME1-201ENST00000309546 ULK1O75385 1050 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 TOXO94900 526 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 ATP1B1P05026 303 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 IMPDH1P20839 514 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 S1PR1P21453 382 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 ELAVL4P26378 380 aaKnown RBP17.9■□□□□ 0.46
LIME1-201ENST00000309546 ABCD3P28288 659 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 TRA2BP62995 288 aaKnown RBP17.9■□□□□ 0.46
LIME1-201ENST00000309546 DUSP2Q05923 314 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 TOMM20Q15388 145 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 C17orf47Q8NEP4 570 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 NEIL3Q8TAT5 605 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 ACMSDQ8TDX5 336 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 C14orf79Q96F83 325 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 KCNA7Q96RP8 456 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 ACPTQ9BZG2 426 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 ACKR4Q9NPB9 350 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 HEY2Q9UBP5 337 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 MCM8Q9UJA3 840 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 CFL2Q9Y281 166 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 STK38LQ9Y2H1 464 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 PLLPQ9Y342 182 aa17.9■□□□□ 0.46
LIME1-201ENST00000309546 A0A0G2JNJ9 132 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 GNG14A0A1W2PPG7 69 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 ANKRD33BA6NCL7 494 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 IL3P08700 152 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 GABRA1P14867 456 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 ZFP36L2P47974 494 aaKnown RBP17.89■□□□□ 0.45
LIME1-201ENST00000309546 PRKAA2P54646 552 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 KRTAP10-9P60411 292 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 MRPS35P82673 323 aaKnown RBP17.89■□□□□ 0.45
LIME1-201ENST00000309546 HMGCS1Q01581 520 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 TFF3Q07654 80 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 PLCXD2Q0VAA5 305 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 MGAT2Q10469 447 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 MAP4K2Q12851 820 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 LCP2Q13094 533 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 DUSP8Q13202 625 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 PACS2Q86VP3 889 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 ACBD4Q8NC06 268 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 SIMC1Q8NDZ2 872 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 OR52R1Q8NGF1 315 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 CNRIP1Q96F85 164 aaPredicted RBP17.89■□□□□ 0.45
LIME1-201ENST00000309546 SECISBP2Q96T21 854 aaKnown RBP17.89■□□□□ 0.45
LIME1-201ENST00000309546 EBPLQ9BY08 206 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 TXLNGYQ9BZA5 131 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 EPB41L4BQ9H329 900 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 METTL7AQ9H8H3 244 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 Q9UFV3 132 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 DLGAP4Q9Y2H0 992 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 TIMM22Q9Y584 194 aa17.89■□□□□ 0.45
LIME1-201ENST00000309546 ADGRG4Q8IZF6 3080 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 SNX4O95219 450 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 CBX7O95931 251 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 ENO1P06733 434 aaKnown RBP17.88■□□□□ 0.45
LIME1-201ENST00000309546 ABCB1P08183 1280 aaPredicted RBP17.88■□□□□ 0.45
LIME1-201ENST00000309546 GSTA1P08263 222 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 PCSK2P16519 638 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 MSX1P28360 303 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 ADH7P40394 386 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 CASP3P42574 277 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 BTKQ06187 659 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 ACSM2AQ08AH3 577 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 TRMT12Q53H54 448 aaKnown RBP17.88■□□□□ 0.45
LIME1-201ENST00000309546 ACSM2BQ68CK6 577 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 SCIMPQ6UWF3 145 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 CCNYL1Q8N7R7 359 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 GBP7Q8N8V2 638 aaPredicted RBP17.88■□□□□ 0.45
LIME1-201ENST00000309546 LRRN4CLQ8ND94 238 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 MZB1Q8WU39 189 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 EXOSC8Q96B26 276 aaKnown RBP17.88■□□□□ 0.45
LIME1-201ENST00000309546 OMA1Q96E52 524 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 L3HYPDHQ96EM0 354 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 APIPQ96GX9 242 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 LCORQ96JN0 433 aaPredicted RBP17.88■□□□□ 0.45
LIME1-201ENST00000309546 ANGPTL4Q9BY76 406 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 MID1IP1Q9NPA3 183 aa17.88■□□□□ 0.45
LIME1-201ENST00000309546 EHD3Q9NZN3 535 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms