RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 DCAF7P61962 342 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ZXDBP98169 803 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 PLP2Q04941 152 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 TRAP1Q12931 704 aaKnown RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 TRAM2Q15035 370 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 CLEC12AQ5QGZ9 265 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 GTF2IRD2BQ6EKJ0 949 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 SBSNQ6UWP8 590 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 GTF2IRD2Q86UP8 949 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 NAXDQ8IW45 347 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 AQP12AQ8IXF9 295 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 PROKR2Q8NFJ6 384 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 OR52R1Q8NGF1 315 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 NEK7Q8TDX7 302 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF184Q99676 751 aaPredicted RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 C19orf43Q9BQ61 176 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 DLGAP2Q9P1A6 1054 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 MMACHCQ9Y4U1 282 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 FAM25AB3EWG3 89 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 FAM25CB3EWG5 89 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 FAM25GB3EWG6 89 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 H0YIV9 168 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 KLK10O43240 276 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 TNFAIP8O95379 198 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 KRT8P05787 483 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 PABPC4LP0CB38 370 aaKnown RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 GFOD2Q3B7J2 385 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF683Q8IZ20 524 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 NLGN4YQ8NFZ3 816 aaPredicted RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 MTHFD2LQ9H903 347 aaPredicted RBP8.75□□□□□ -1.01
PTPRE-202ENST00000306042 SLC24A3Q9HC58 644 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 ASB6Q9NWX5 421 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 TVP23BQ9NYZ1 205 aa8.75□□□□□ -1.01
PTPRE-202ENST00000306042 PRR33A8MZF0 331 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 ALOX12BO75342 701 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 PDGFBP01127 241 aaPredicted RBP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 NPPBP16860 134 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 SSR4P51571 173 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 FOXA1P55317 472 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 ITGADQ13349 1161 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 KIAA1614Q5VZ46 1190 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 NANOGP8Q6NSW7 305 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 TMEM214Q6NUQ4 689 aaKnown RBP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 MSANTD1Q6ZTZ1 278 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 HMGN2P46Q86SG4 172 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 TMEM178AQ8NBL3 297 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 OR8J3Q8NGG0 315 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 TAAR9Q96RI9 348 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 ADOQ96SZ5 270 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 GPER1Q99527 375 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 MAPKAP1Q9BPZ7 522 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 NANOGQ9H9S0 305 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 FSCN3Q9NQT6 498 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 TAS2R1Q9NYW7 299 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 GRHPRQ9UBQ7 328 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 EBF1Q9UH73 591 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 POU2F3Q9UKI9 436 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 RPH3AQ9Y2J0 694 aaPredicted RBP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 TRIP11Q15643 1979 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 KRBA1A5PL33 1030 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 EFCAB9A8MZ26 197 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 ZNF3P17036 446 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 SDC1P18827 310 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 SLC6A9P48067 706 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 GPR143P51810 404 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 TNFRSF17Q02223 184 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 EXOSC7Q15024 291 aaKnown RBP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 SLC34A3Q8N130 599 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 OR52A5Q9H2C5 316 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 ICKQ9UPZ9 632 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 POMPQ9Y244 141 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 CCDC163A0A0D9SF12 145 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 ARGFXA6NJG6 315 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 BCKDKO14874 412 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 MPZL2O60487 215 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 AIFM1O95831 613 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 CD1CP29017 333 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 LTBRP36941 435 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 VMACQ2NL98 169 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 CARM1Q86X55 608 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 CIDECQ96AQ7 238 aaPredicted RBP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 LINC00615Q96LM1 132 aaPredicted RBP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 OSBPL11Q9BXB4 747 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 TXLNGYQ9BZA5 131 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 CENPMQ9NSP4 180 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 CKLFQ9UBR5 152 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 MRPS2Q9Y399 296 aaKnown RBP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 C11orf98E9PRG8 122 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 NOBOXO60393 691 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 KCNK5O95279 499 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 PEX11BO96011 259 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 THRBP10828 461 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 BCL6P41182 706 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 TRA2AQ13595 282 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTPRE-202ENST00000306042 EXT1Q16394 746 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 ZSWIM7Q19AV6 140 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 FRRS1Q6ZNA5 592 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 METTL4Q8N3J2 472 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 UBTD2Q8WUN7 234 aa8.74□□□□□ -1.01
PTPRE-202ENST00000306042 ASB9Q96DX5 294 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms