RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ANXA8P13928 327 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 P2RY2P41231 377 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 HSPA7P48741 367 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 METAP1P53582 386 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 ATP12AP54707 1039 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 PSPHP78330 225 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 NFKB2Q00653 900 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 PTSQ03393 145 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 ELOAQ14241 798 aaKnown RBP10.35□□□□□ -0.75
LSM3-201ENST00000306024 CFAP206Q8IYR0 622 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 CBARPQ8N350 705 aaPredicted RBP10.35□□□□□ -0.75
LSM3-201ENST00000306024 NLGN4YQ8NFZ3 816 aaPredicted RBP10.35□□□□□ -0.75
LSM3-201ENST00000306024 OR4F6Q8NGB9 312 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 SELENOMQ8WWX9 145 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 NELL1Q92832 810 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 GLYATL1Q969I3 302 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 RNF170Q96K19 258 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 SPNS1Q9H2V7 528 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 IKZF5Q9H5V7 419 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 WDR26Q9H7D7 661 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 DNAJC27Q9NZQ0 273 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 CYP8B1Q9UNU6 501 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 ANTXRLA6NF34 631 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 FAM220BPB1ANY3 271 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 TEX46H3BTG2 121 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 HCN1O60741 890 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 GPX5O75715 221 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 OPN1SWP03999 348 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 CATP04040 527 aaKnown RBP10.35□□□□□ -0.75
LSM3-201ENST00000306024 C1SP09871 688 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 ATP1B2P14415 290 aaPredicted RBP10.35□□□□□ -0.75
LSM3-201ENST00000306024 ACRV1P26436 265 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 GGT2P36268 569 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 ETV6P41212 452 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 SUOXP51687 545 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 TMEM31Q5JXX7 168 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 CNIH2Q6PI25 160 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 TMEM65Q6PI78 240 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 TMEM207Q6UWW9 146 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 RDH10Q8IZV5 341 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 SLC5A11Q8WWX8 675 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 TPSD1Q9BZJ3 242 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 ACSL5Q9ULC5 683 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 STUB1Q9UNE7 303 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 POFUT2Q9Y2G5 429 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 KIAA1671Q9BY89 1806 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 LOC105369274A0A096LPK9 316 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 A0A1W2PPL8 197 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 OR5K3A6NET4 321 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 RAF1P04049 648 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 ALPPP05187 535 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 KDELR2P33947 212 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 PXNP49023 591 aaPredicted RBP10.35□□□□□ -0.75
LSM3-201ENST00000306024 GPR85P60893 370 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 TSPAN5P62079 268 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 HYAL2Q12891 473 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 GBX1Q14549 363 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 IRF3Q14653 427 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 COL28A1Q2UY09 1125 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 CDKL4Q5MAI5 379 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 NDUFAF5Q5TEU4 345 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 LAIR1Q6GTX8 287 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 TMEM81Q6P7N7 255 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 FAM9CQ8IZT9 166 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 OR4N4Q8N0Y3 316 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 TRAM1L1Q8N609 369 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 UXS1Q8NBZ7 420 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 VPS37AQ8NEZ2 397 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 RHEBL1Q8TAI7 183 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 CD93Q9NPY3 652 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 DNAJC11Q9NVH1 559 aa10.35□□□□□ -0.75
LSM3-201ENST00000306024 PTPRSQ13332 1948 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 CLIC1O00299 241 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 RNGTTO60942 597 aaKnown RBP10.34□□□□□ -0.75
LSM3-201ENST00000306024 ZNF821O75541 412 aaPredicted RBP10.34□□□□□ -0.75
LSM3-201ENST00000306024 HRGP04196 525 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 MMP12P39900 470 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 KIR3DL1P43629 444 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 GBX2P52951 348 aaPredicted RBP10.34□□□□□ -0.75
LSM3-201ENST00000306024 CRISP3P54108 245 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 RPS14P62263 151 aaKnown RBP10.34□□□□□ -0.75
LSM3-201ENST00000306024 RPS21P63220 83 aaKnown RBP10.34□□□□□ -0.75
LSM3-201ENST00000306024 VLDLRP98155 873 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 GTF2H2Q13888 395 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 TMEM196Q5HYL7 178 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 GTF2H2CQ6P1K8 395 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 FTMTQ8N4E7 242 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 SLC5A8Q8N695 610 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 GPR150Q8NGU9 434 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 SLC22A8Q8TCC7 542 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 KCNJ9Q92806 393 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 RHBDF1Q96CC6 855 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 ABCG5Q9H222 651 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 FBRSQ9HAH7 460 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 HPF1Q9NWY4 346 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 FPGTO14772 594 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 COX7A2P14406 83 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 MAP2K6P52564 334 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 SMSP52788 366 aa10.34□□□□□ -0.75
LSM3-201ENST00000306024 ERVPABLB-1P60509 514 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms