RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 C16orf58Q96GQ5 468 aa8.82□□□□□ -1
RFX3-201ENST00000302303 CCNL2Q96S94 520 aaPredicted RBP8.82□□□□□ -1
RFX3-201ENST00000302303 PELOQ9BRX2 385 aaKnown RBP8.82□□□□□ -1
RFX3-201ENST00000302303 NANOGQ9H9S0 305 aa8.82□□□□□ -1
RFX3-201ENST00000302303 GIMAP4Q9NUV9 329 aa8.82□□□□□ -1
RFX3-201ENST00000302303 PTGFRNQ9P2B2 879 aa8.82□□□□□ -1
RFX3-201ENST00000302303 FBXL4Q9UKA2 621 aa8.82□□□□□ -1
RFX3-201ENST00000302303 ERVK-19Q9WJR5 959 aa8.82□□□□□ -1
RFX3-201ENST00000302303 RAXQ9Y2V3 346 aa8.82□□□□□ -1
RFX3-201ENST00000302303 CLCA3PQ9Y6N3 262 aa8.82□□□□□ -1
RFX3-201ENST00000302303 PRAMEF27A3QJZ7 478 aa8.81□□□□□ -1
RFX3-201ENST00000302303 AIM2O14862 343 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ANGPT2O15123 496 aa8.81□□□□□ -1
RFX3-201ENST00000302303 EMC8O43402 210 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ZNF354AO60765 605 aaPredicted RBP8.81□□□□□ -1
RFX3-201ENST00000302303 SLITRK5O94991 958 aa8.81□□□□□ -1
RFX3-201ENST00000302303 DDX5P17844 614 aaKnown RBP8.81□□□□□ -1
RFX3-201ENST00000302303 TNNI3P19429 210 aa8.81□□□□□ -1
RFX3-201ENST00000302303 UQCRC2P22695 453 aa8.81□□□□□ -1
RFX3-201ENST00000302303 SLC6A2P23975 617 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ITPKBP27987 946 aa8.81□□□□□ -1
RFX3-201ENST00000302303 PGDP52209 483 aa8.81□□□□□ -1
RFX3-201ENST00000302303 PSG6Q00889 435 aa8.81□□□□□ -1
RFX3-201ENST00000302303 TLE3Q04726 772 aa8.81□□□□□ -1
RFX3-201ENST00000302303 LRRC74AQ0VAA2 488 aa8.81□□□□□ -1
RFX3-201ENST00000302303 MAPK11Q15759 364 aa8.81□□□□□ -1
RFX3-201ENST00000302303 TRMT5Q32P41 509 aaKnown RBP8.81□□□□□ -1
RFX3-201ENST00000302303 COX20Q5RI15 118 aa8.81□□□□□ -1
RFX3-201ENST00000302303 HACD2Q6Y1H2 254 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ZNF621Q6ZSS3 439 aa8.81□□□□□ -1
RFX3-201ENST00000302303 C6orf120Q7Z4R8 191 aa8.81□□□□□ -1
RFX3-201ENST00000302303 WDR53Q7Z5U6 358 aaPredicted RBP8.81□□□□□ -1
RFX3-201ENST00000302303 PROSER1Q86XN7 944 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ARMC10Q8N2F6 343 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ZNF441Q8N8Z8 693 aa8.81□□□□□ -1
RFX3-201ENST00000302303 C7orf57Q8NEG2 295 aa8.81□□□□□ -1
RFX3-201ENST00000302303 VPS37AQ8NEZ2 397 aa8.81□□□□□ -1
RFX3-201ENST00000302303 OR52R1Q8NGF1 315 aa8.81□□□□□ -1
RFX3-201ENST00000302303 OR14A16Q8NHC5 309 aa8.81□□□□□ -1
RFX3-201ENST00000302303 C16orf52Q8NHV5 167 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ZFP28Q8NHY6 868 aa8.81□□□□□ -1
RFX3-201ENST00000302303 SFXN5Q8TD22 340 aa8.81□□□□□ -1
RFX3-201ENST00000302303 DAZLQ92904 295 aaKnown RBP8.81□□□□□ -1
RFX3-201ENST00000302303 NCLNQ969V3 563 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ADIPOR1Q96A54 375 aa8.81□□□□□ -1
RFX3-201ENST00000302303 KIAA1143Q96AT1 154 aaPredicted RBP8.81□□□□□ -1
RFX3-201ENST00000302303 NEURL3Q96EH8 262 aa8.81□□□□□ -1
RFX3-201ENST00000302303 MAGED4Q96JG8 741 aa8.81□□□□□ -1
RFX3-201ENST00000302303 VSTM2LQ96N03 204 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ANKRD27Q96NW4 1050 aa8.81□□□□□ -1
RFX3-201ENST00000302303 CGREF1Q99674 301 aa8.81□□□□□ -1
RFX3-201ENST00000302303 LPAR4Q99677 370 aa8.81□□□□□ -1
RFX3-201ENST00000302303 CPPED1Q9BRF8 314 aaPredicted RBP8.81□□□□□ -1
RFX3-201ENST00000302303 OR10A5Q9H207 317 aa8.81□□□□□ -1
RFX3-201ENST00000302303 RMND5AQ9H871 391 aa8.81□□□□□ -1
RFX3-201ENST00000302303 EFCAB1Q9HAE3 211 aa8.81□□□□□ -1
RFX3-201ENST00000302303 IL1RL2Q9HB29 575 aa8.81□□□□□ -1
RFX3-201ENST00000302303 ZNF160Q9HCG1 818 aa8.81□□□□□ -1
RFX3-201ENST00000302303 NEUROD4Q9HD90 331 aa8.81□□□□□ -1
RFX3-201ENST00000302303 TAS2R1Q9NYW7 299 aa8.81□□□□□ -1
RFX3-201ENST00000302303 GMPR2Q9P2T1 348 aaKnown RBP8.81□□□□□ -1
RFX3-201ENST00000302303 KCNE3Q9Y6H6 103 aa8.81□□□□□ -1
RFX3-201ENST00000302303 A0A087WV48 116 aa8.8□□□□□ -1
RFX3-201ENST00000302303 SYNDIG1LA6NDD5 238 aa8.8□□□□□ -1
RFX3-201ENST00000302303 CLIC1O00299 241 aa8.8□□□□□ -1
RFX3-201ENST00000302303 MAN1A2O60476 641 aa8.8□□□□□ -1
RFX3-201ENST00000302303 KCNH1O95259 989 aa8.8□□□□□ -1
RFX3-201ENST00000302303 HPP00738 406 aa8.8□□□□□ -1
RFX3-201ENST00000302303 NPPAP01160 153 aa8.8□□□□□ -1
RFX3-201ENST00000302303 HMGN2P05204 90 aaKnown RBP8.8□□□□□ -1
RFX3-201ENST00000302303 CT45A8P0DMV1 189 aa8.8□□□□□ -1
RFX3-201ENST00000302303 CT45A9P0DMV2 189 aa8.8□□□□□ -1
RFX3-201ENST00000302303 ACP2P11117 423 aa8.8□□□□□ -1
RFX3-201ENST00000302303 ESRRAP11474 423 aaPredicted RBP8.8□□□□□ -1
RFX3-201ENST00000302303 GPX2P18283 190 aa8.8□□□□□ -1
RFX3-201ENST00000302303 CALB2P22676 271 aa8.8□□□□□ -1
RFX3-201ENST00000302303 CASP9P55211 416 aa8.8□□□□□ -1
RFX3-201ENST00000302303 SLC25A3Q00325 362 aa8.8□□□□□ -1
RFX3-201ENST00000302303 NFYCQ13952 458 aa8.8□□□□□ -1
RFX3-201ENST00000302303 EBPQ15125 230 aaKnown RBP8.8□□□□□ -1
RFX3-201ENST00000302303 CT45A2Q5DJT8 189 aa8.8□□□□□ -1
RFX3-201ENST00000302303 RABL3Q5HYI8 236 aa8.8□□□□□ -1
RFX3-201ENST00000302303 DCAF10Q5QP82 559 aa8.8□□□□□ -1
RFX3-201ENST00000302303 C6orf10Q5SRN2 563 aa8.8□□□□□ -1
RFX3-201ENST00000302303 MFSD12Q6NUT3 480 aa8.8□□□□□ -1
RFX3-201ENST00000302303 H3F3CQ6NXT2 135 aa8.8□□□□□ -1
RFX3-201ENST00000302303 NPSR1Q6W5P4 371 aa8.8□□□□□ -1
RFX3-201ENST00000302303 C16orf47Q6ZP98 133 aaPredicted RBP8.8□□□□□ -1
RFX3-201ENST00000302303 DHDDSQ86SQ9 333 aa8.8□□□□□ -1
RFX3-201ENST00000302303 SLC15A3Q8IY34 581 aa8.8□□□□□ -1
RFX3-201ENST00000302303 SLC16A11Q8NCK7 471 aa8.8□□□□□ -1
RFX3-201ENST00000302303 RBM15BQ8NDT2 890 aaKnown RBP8.8□□□□□ -1
RFX3-201ENST00000302303 NUP43Q8NFH3 380 aa8.8□□□□□ -1
RFX3-201ENST00000302303 OR7G1Q8NGA0 311 aa8.8□□□□□ -1
RFX3-201ENST00000302303 DNAJB8Q8NHS0 232 aa8.8□□□□□ -1
RFX3-201ENST00000302303 M1APQ8TC57 530 aa8.8□□□□□ -1
RFX3-201ENST00000302303 MIPOL1Q8TD10 442 aa8.8□□□□□ -1
RFX3-201ENST00000302303 TMEM125Q96AQ2 219 aa8.8□□□□□ -1
RFX3-201ENST00000302303 SLC35A5Q9BS91 424 aa8.8□□□□□ -1
RFX3-201ENST00000302303 TUBB6Q9BUF5 446 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms