RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 ATAT1Q5SQI0 421 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 ENPP7Q6UWV6 458 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 BCDIN3DQ7Z5W3 292 aaKnown RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 CACTIN-AS1Q8N1I8 211 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 NUP43Q8NFH3 380 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 CREB3L4Q8TEY5 395 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 KAT2AQ92830 837 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 SLC38A2Q96QD8 506 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 CALML5Q9NZT1 146 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 ZFR2Q9UPR6 939 aaKnown RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 MTCL1Q9Y4B5 1905 aaKnown RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 A0A0G2JPF8 293 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 HNRNPCL2B2RXH8 293 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 HNRNPCL3B7ZW38 293 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 UPK1BO75841 260 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 HNRNPCL4P0DMR1 293 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 NR2F6P10588 404 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 AVPR1BP47901 424 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 PCYT1AP49585 367 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 SMSP52788 366 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 RGS8P57771 180 aaPredicted RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 SNRPGP62308 76 aaKnown RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 IFITM3Q01628 133 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 ZNF91Q05481 1191 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 KRR1Q13601 381 aaKnown RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 NCF4Q15080 339 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 TRIM48Q8IWZ4 208 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 SLC9A6Q92581 669 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 MOAP1Q96BY2 351 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 LRR1Q96L50 414 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 PSD2Q9BQI7 771 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 ASPNQ9BXN1 380 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 BTBD1Q9H0C5 482 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 QRSL1Q9H0R6 528 aaKnown RBP12.84□□□□□ -0.35
CDH8-201ENST00000299345 SRMSQ9H3Y6 488 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 DZANK1Q9NVP4 752 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 SPHK1Q9NYA1 384 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 NCKAP1Q9Y2A7 1128 aa12.84□□□□□ -0.35
CDH8-201ENST00000299345 KIAA1671Q9BY89 1806 aa12.83□□□□□ -0.35
CDH8-201ENST00000299345 LOC110117498-PIK3R3F6TDL0 507 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 KCNJ13O60928 360 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 CHRM5P08912 532 aaPredicted RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 GSTM3P21266 225 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 AHRP35869 848 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 SOX3P41225 446 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 MC3RP41968 323 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 FGL2Q14314 439 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 ZNF770Q6IQ21 691 aaPredicted RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 AMIGO1Q86WK6 493 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 EGFL6Q8IUX8 553 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 CYP4Z2PQ8N1L4 340 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 OR4D11Q8NGI4 311 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 ZCCHC10Q8TBK6 192 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 OR2M4Q96R27 311 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 SERHL2Q9H4I8 314 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 CCDC59Q9P031 241 aaKnown RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 ISPDA4D126 451 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 FRS3O43559 492 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 SLC35G6P0C7Q6 338 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 ACADMP11310 421 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 EIF2DP41214 584 aaKnown RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 ACTR1BP42025 376 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 GIPRP48546 466 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 ACTR1AP61163 376 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 DMPKQ09013 629 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 MLC1Q15049 377 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 MEX3DQ86XN8 651 aaKnown RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 FBXL6Q8N531 539 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 CDADC1Q9BWV3 514 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 C1QTNF2Q9BXJ5 285 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 SLC6A17Q9H1V8 727 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 SNTG1Q9NSN8 517 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 CLEC2DQ9UHP7 191 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 ZNF232Q9UNY5 417 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 A3GALT2U3KPV4 340 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 ATG2BQ96BY7 2078 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 A0A1W2PRQ8 180 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 CPSF4LA6NMK7 179 aaKnown RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 FAM170BA6NMN3 283 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 RECKO95980 971 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 ZNF181Q2M3W8 571 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 TYW3Q6IPR3 259 aaKnown RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 PLEKHM3Q6ZWE6 761 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 TP53I13Q8NBR0 393 aaPredicted RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 OR9A2Q8NGT5 310 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 OR10G6Q8NH81 332 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 CNRIP1Q96F85 164 aaPredicted RBP12.83□□□□□ -0.36
CDH8-201ENST00000299345 PRRC1Q96M27 445 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 NEURL2Q9BR09 285 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 MENTQ9BUN1 341 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 PLA2G2FQ9BZM2 168 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 MIR1-1HGQ9H1L0 117 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 PCDHGA3Q9Y5H0 932 aa12.83□□□□□ -0.36
CDH8-201ENST00000299345 IGKV1-8A0A0C4DH67 115 aa12.82□□□□□ -0.36
CDH8-201ENST00000299345 CHRM4P08173 479 aa12.82□□□□□ -0.36
CDH8-201ENST00000299345 CD72P21854 359 aa12.82□□□□□ -0.36
CDH8-201ENST00000299345 CPN2P22792 545 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms