RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 FRKP42685 505 aaPredicted RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 STT3AP46977 705 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 ALDH9A1P49189 494 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 MRPL19P49406 292 aaKnown RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 NME5P56597 212 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 WNT3P56703 355 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 UFM1P61960 85 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 CHAF1BQ13112 559 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 SLC13A2Q13183 592 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 LTB4RQ15722 352 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 NSDHLQ15738 373 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 SFT2D3Q587I9 215 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 MFSD4BQ5TF39 518 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 INO80CQ6PI98 192 aaPredicted RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 IKBIPQ70UQ0 350 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 CPEB2Q7Z5Q1 589 aaKnown RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 TICAM1Q8IUC6 712 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 FUNDC1Q8IVP5 155 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 KIRREL3Q8IZU9 778 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 OR9I1Q8NGQ6 314 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 CDC26Q8NHZ8 85 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 PTPMT1Q8WUK0 201 aaPredicted RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 TANKQ92844 425 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 KIAA1143Q96AT1 154 aaPredicted RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 EXOSC8Q96B26 276 aaKnown RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 PPWD1Q96BP3 646 aaKnown RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 KLHL29Q96CT2 875 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 CHMP6Q96FZ7 201 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 ZNF764Q96H86 408 aaPredicted RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 IMMP1LQ96LU5 166 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 PTCHD1Q96NR3 888 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 CATSPER2Q96P56 530 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 NPAS2Q99743 824 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 CCDC28BQ9BUN5 200 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 ALOXE3Q9BYJ1 711 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 TRIM55Q9BYV6 548 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 ZNF700Q9H0M5 742 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 RABEP2Q9H5N1 569 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 PRORYQ9H606 182 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 CLMPQ9H6B4 373 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 SLC52A3Q9NQ40 469 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 TCF7L2Q9NQB0 619 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 P4HTMQ9NXG6 502 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 TAS2R7Q9NYW3 318 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 ATP6V1HQ9UI12 483 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 ADAM21Q9UKJ8 722 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 G3BP2Q9UN86 482 aaKnown RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 PPIEQ9UNP9 301 aaKnown RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 PADI2Q9Y2J8 665 aa5.5□□□□□ -1.53
SSX3-201ENST00000298396 COPG1Q9Y678 874 aaKnown RBP5.5□□□□□ -1.53
SSX3-201ENST00000298396 A0A0G2JND7 137 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 BLACEA4D250 179 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 SAGE2PA6NJ88 616 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 TMEM200CA6NKL6 621 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 SLC22A31A6NKX4 558 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 PSMD12O00232 456 aaPredicted RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 UBDO15205 165 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 KALRNO60229 2985 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 NME6O75414 186 aaPredicted RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 ERAL1O75616 437 aaKnown RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 DNAJB5O75953 348 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 MYO1DO94832 1006 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 SLITRK5O94991 958 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 IGKV3-11P04433 115 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 CYC1P08574 325 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 CD63P08962 238 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 ITGAMP11215 1152 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 TLX1P31314 330 aaPredicted RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 GSTM5P46439 218 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 GIPRP48546 466 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 XKP51811 444 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 CLDN8P56748 225 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 OR4D2P58180 307 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 PRICKLE4Q2TBC4 344 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 DEFB109BQ30KR1 87 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 PDCD4Q53EL6 469 aaKnown RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 ZNF628Q5EBL2 1059 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 SPANXN4Q5MJ08 99 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 FHL5Q5TD97 284 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 NXNQ6DKJ4 435 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 PAPD4Q6PIY7 484 aaKnown RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 FAM111BQ6SJ93 734 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 PCSK4Q6UW60 755 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 CCDC81Q6ZN84 652 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 ZNF551Q7Z340 670 aaPredicted RBP5.49□□□□□ -1.53
SSX3-201ENST00000298396 SPATA19Q7Z5L4 167 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 CAMKMTQ7Z624 323 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 RAB43Q86YS6 212 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 TMEM132CQ8N3T6 1108 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 KIF2BQ8N4N8 673 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 APCDD1LQ8NCL9 501 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 ADCY4Q8NFM4 1077 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 OR4K14Q8NGD5 310 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 CEP70Q8NHQ1 597 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 DNAJB8Q8NHS0 232 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 ZNF721Q8TF20 911 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 PSMF1Q92530 271 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 COQ8BQ96D53 544 aa5.49□□□□□ -1.53
SSX3-201ENST00000298396 AMDHD1Q96NU7 426 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms