RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PRAMEF27A3QJZ7 478 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 ADAMDEC1O15204 470 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 NUDT21O43809 227 aaKnown RBP13.39□□□□□ -0.27
C9orf3-202ENST00000297979 RDH16O75452 317 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 CLIC3O95833 236 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 CPMP14384 443 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 RAB38P57729 211 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 RFX4Q33E94 735 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 NKAIN2Q5VXU1 208 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 ANKRD34AQ69YU3 496 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 LGI4Q8N135 537 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 OR9A4Q8NGU2 314 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 OTUB1Q96FW1 271 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-202ENST00000297979 AHCYL2Q96HN2 611 aaKnown RBP13.39□□□□□ -0.27
C9orf3-202ENST00000297979 ALPK1Q96QP1 1244 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 ELF4Q99607 663 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-202ENST00000297979 BARD1Q99728 777 aaKnown RBP13.39□□□□□ -0.27
C9orf3-202ENST00000297979 DDX18Q9NVP1 670 aaKnown RBP13.39□□□□□ -0.27
C9orf3-202ENST00000297979 PLCL2Q9UPR0 1127 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 CLCA2Q9UQC9 943 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 ORC6Q9Y5N6 252 aa13.39□□□□□ -0.27
C9orf3-202ENST00000297979 IGHV5-51A0A0C4DH38 117 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 PRAMEF25A6NGN4 478 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 MFN2O95140 757 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 SMIM18P0DKX4 95 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 PORP16435 677 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-202ENST00000297979 NELFEP18615 380 aaKnown RBP13.38□□□□□ -0.27
C9orf3-202ENST00000297979 CD247P20963 164 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 RRM2P31350 389 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 GABRA4P48169 554 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 CRISP3P54108 245 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 SKP1P63208 163 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 GNA13Q14344 377 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 LAPTM4AQ15012 233 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 NDUFA9Q16795 377 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 CYP27C1Q4G0S4 372 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 SLC35F3Q8IY50 421 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 OFCC1Q8IZS5 231 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 TTC29Q8NA56 475 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-202ENST00000297979 TMEM52Q8NDY8 209 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 OR7G2Q8NG99 324 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 TANKQ92844 425 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 C16orf58Q96GQ5 468 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 ZNF300Q96RE9 604 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-202ENST00000297979 MBOAT4Q96T53 435 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 UQCC2Q9BRT2 126 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 CHRNA10Q9GZZ6 450 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 ANKRA2Q9H9E1 313 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 PDE7BQ9NP56 450 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 NTMQ9P121 344 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 SH3GLB1Q9Y371 365 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 PCDHGB3Q9Y5G1 929 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 LAMTOR5O43504 91 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 FGF17O60258 216 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 SERPINB7O75635 380 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 RAD23AP54725 363 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 BNC1Q01954 994 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 ID2Q02363 134 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 SRSF5Q13243 272 aaKnown RBP13.38□□□□□ -0.27
C9orf3-202ENST00000297979 DUSP7Q16829 419 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 GALNT15Q8N3T1 639 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 BBS10Q8TAM1 723 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 RASSF5Q8WWW0 418 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 GIMAP5Q96F15 307 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 RMND5BQ96G75 393 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-202ENST00000297979 ZNF285Q96NJ3 590 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 MS4A4EQ96PG1 132 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 OR7D2Q96RA2 312 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 EQTNQ9NQ60 294 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 PDP1Q9P0J1 537 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-202ENST00000297979 TMEFF2Q9UIK5 374 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-202ENST00000297979 MYRFQ9Y2G1 1151 aa13.38□□□□□ -0.27
C9orf3-202ENST00000297979 MYOCOSA0A1B0GUC4 107 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 ASNA1O43681 348 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 LDB3O75112 727 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 H6PDO95479 791 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 GIMD1P0DJR0 217 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 IGFBP5P24593 272 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 OR1D5P58170 312 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 KCNC4Q03721 635 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 SHBQ15464 509 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 TTC23Q5W5X9 447 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 FAM111BQ6SJ93 734 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 KRT73Q86Y46 540 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 SHISA5Q8N114 240 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 GAB3Q8WWW8 586 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 COL21A1Q96P44 957 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 ACTRT3Q9BYD9 372 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 EPB41L1Q9H4G0 881 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 BCL2L10Q9HD36 194 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 EXD2Q9NVH0 621 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 PTGFRNQ9P2B2 879 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 KLHL3Q9UH77 587 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 TESMINQ9Y4I5 508 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 GPC6Q9Y625 555 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-202ENST00000297979 TNRC6BQ9UPQ9 1833 aaKnown RBP13.37□□□□□ -0.27
C9orf3-202ENST00000297979 IGHV1OR21-1A0A087WYE8 117 aa13.37□□□□□ -0.27
C9orf3-202ENST00000297979 A0A0A6YYC8 382 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms