RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 GLE1Q53GS7 698 aaKnown RBP23.11■■□□□ 1.29
U2AF1-201ENST00000291552 UNC50Q53HI1 259 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 TBCELQ5QJ74 424 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 RIPPLY2Q5TAB7 128 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 DESI1Q6ICB0 168 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 VWA5B2Q8N398 1253 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 C1orf52Q8N6N3 182 aaKnown RBP23.11■■□□□ 1.29
U2AF1-201ENST00000291552 MNS1Q8NEH6 495 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 TMEM237Q96Q45 408 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 ITPAQ9BY32 194 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 TMEM216Q9P0N5 145 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 B4GALT7Q9UBV7 327 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 SNX6Q9UNH7 406 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 C2CD3Q4AC94 2353 aa23.11■■□□□ 1.29
U2AF1-201ENST00000291552 FOXO6A8MYZ6 492 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 CBX7O95931 251 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 ATP1B1P05026 303 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 GABRA1P14867 456 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 CHN1P15882 459 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 ABCD3P28288 659 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 CLCQ05315 142 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 MAP4K2Q12851 820 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 LTB4RQ15722 352 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 FAM180BQ6P0A1 224 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 TIFABQ6ZNK6 161 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 SECISBP2Q96T21 854 aaKnown RBP23.1■■□□□ 1.29
U2AF1-201ENST00000291552 NFU1Q9UMS0 254 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 C15orf41Q9Y2V0 281 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 PCDHGB3Q9Y5G1 929 aa23.1■■□□□ 1.29
U2AF1-201ENST00000291552 CAPN14A8MX76 684 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 MANBAO00462 879 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 DLX3O60479 287 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 ERAL1O75616 437 aaKnown RBP23.09■■□□□ 1.29
U2AF1-201ENST00000291552 ABCB1P08183 1280 aaPredicted RBP23.09■■□□□ 1.29
U2AF1-201ENST00000291552 CASP3P42574 277 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 TMED10P49755 219 aaKnown RBP23.09■■□□□ 1.29
U2AF1-201ENST00000291552 CDK9P50750 372 aaKnown RBP23.09■■□□□ 1.29
U2AF1-201ENST00000291552 WNT3P56703 355 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 ZNF678Q5SXM1 525 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 TMEM198Q66K66 360 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 LIX1Q8N485 282 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 CDYL2Q8N8U2 506 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 ADCY4Q8NFM4 1077 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 CTHRC1Q96CG8 243 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 KLHL29Q96CT2 875 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 CNRIP1Q96F85 164 aaPredicted RBP23.09■■□□□ 1.29
U2AF1-201ENST00000291552 ZNF681Q96N22 645 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 BRINP2Q9C0B6 783 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 HEY2Q9UBP5 337 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 MTORP42345 2549 aa23.09■■□□□ 1.29
U2AF1-201ENST00000291552 C15orf38-AP3S2A0A0A6YYH1 394 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 HPNP05981 417 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 HTR6P50406 440 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 NRG3P56975 720 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 ACSF3Q4G176 576 aaPredicted RBP23.08■■□□□ 1.29
U2AF1-201ENST00000291552 TEX35Q5T0J7 233 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 C6orf163Q5TEZ5 329 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 RELL2Q8NC24 303 aaPredicted RBP23.08■■□□□ 1.29
U2AF1-201ENST00000291552 NAXEQ8NCW5 288 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 HGDQ93099 445 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 GNRHR2Q96P88 292 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 ZNF382Q96SR6 550 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 KCNN3Q9UGI6 736 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 L3MBTL1Q9Y468 752 aa23.08■■□□□ 1.29
U2AF1-201ENST00000291552 MPDZO75970 2070 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 GOLGA6L10A6NI86 522 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 GUCY1B2O75343 617 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 PPM1BO75688 479 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 SNX4O95219 450 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 CSNK2A2P19784 350 aaPredicted RBP23.07■■□□□ 1.28
U2AF1-201ENST00000291552 PTGDSP41222 190 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 RAE1P78406 368 aaKnown RBP23.07■■□□□ 1.28
U2AF1-201ENST00000291552 SLC25A35Q3KQZ1 300 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 TRMT12Q53H54 448 aaKnown RBP23.07■■□□□ 1.28
U2AF1-201ENST00000291552 DCST1Q5T197 706 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 TMEM41AQ96HV5 264 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 TIMP4Q99727 224 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 ACPTQ9BZG2 426 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 VPS29Q9UBQ0 182 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 BCAP29Q9UHQ4 241 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 PLLPQ9Y342 182 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 SLC6A5Q9Y345 797 aa23.07■■□□□ 1.28
U2AF1-201ENST00000291552 RIPK2O43353 540 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 SUPT7LO94864 414 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 PCSK2P16519 638 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 PTPN6P29350 595 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 DEKP35659 375 aaKnown RBP23.06■■□□□ 1.28
U2AF1-201ENST00000291552 ALDH9A1P49189 494 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 MRPS35P82673 323 aaKnown RBP23.06■■□□□ 1.28
U2AF1-201ENST00000291552 RASA2Q15283 850 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 EIPR1Q53HC9 387 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 WDR53Q7Z5U6 358 aaPredicted RBP23.06■■□□□ 1.28
U2AF1-201ENST00000291552 OR52R1Q8NGF1 315 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 OMA1Q96E52 524 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 NODALQ96S42 347 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 ZNF559Q9BR84 538 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 PRDM14Q9GZV8 571 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 EPB41L4BQ9H329 900 aa23.06■■□□□ 1.28
U2AF1-201ENST00000291552 ITPR3Q14573 2671 aa23.05■■□□□ 1.28
U2AF1-201ENST00000291552 TRAPPC6AO75865 159 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms