RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 BAIAP2L1Q9UHR4 511 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 NPIPA1Q9UND3 350 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 EXO1Q9UQ84 846 aaKnown RBP23.21■■□□□ 1.31
PDF-201ENST00000288022 OSGIN2Q9Y236 505 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 CROCCQ5TZA2 2017 aa23.21■■□□□ 1.31
PDF-201ENST00000288022 MYO1GB0I1T2 1018 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 AGFG2O95081 481 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 NRG3P56975 720 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 WDR4P57081 412 aaKnown RBP23.2■■□□□ 1.3
PDF-201ENST00000288022 DUSP8Q13202 625 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 UBAP2LQ14157 1087 aaKnown RBP23.2■■□□□ 1.3
PDF-201ENST00000288022 CEBPEQ15744 281 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 LYPD8Q6UX82 237 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 TMEM64Q6YI46 380 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 DND1Q8IYX4 353 aaKnown RBP23.2■■□□□ 1.3
PDF-201ENST00000288022 OR5M3Q8NGP4 307 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 ADIPOR1Q96A54 375 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 TUBGCP3Q96CW5 907 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 PPP1R36Q96LQ0 422 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 ITPAQ9BY32 194 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 DEPPQ9NTK1 212 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 TAS2R7Q9NYW3 318 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 PRODH2Q9UF12 536 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 DTX4Q9Y2E6 619 aa23.2■■□□□ 1.3
PDF-201ENST00000288022 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.2■■□□□ 1.3
PDF-201ENST00000288022 PRRC2CQ9Y520 2896 aaKnown RBP23.19■■□□□ 1.3
PDF-201ENST00000288022 BCAS2O75934 225 aaPredicted RBP23.19■■□□□ 1.3
PDF-201ENST00000288022 FBXO45P0C2W1 286 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 CCL3P10147 92 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 BCKDHAP12694 445 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 SOX18P35713 384 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 ASMTP46597 345 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 RPL14P50914 215 aaKnown RBP23.19■■□□□ 1.3
PDF-201ENST00000288022 NNATQ16517 81 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 AGBL2Q5U5Z8 902 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 ANKRD26P1Q6NSI1 321 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 FAM47EQ6ZV65 393 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 FNDC5Q8NAU1 212 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 OR2M7Q8NG81 312 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 PPCDCQ96CD2 204 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 SORT1Q99523 831 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 C1orf50Q9BV19 199 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 REEP4Q9H6H4 257 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 ANKRA2Q9H9E1 313 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 RYDENQ9NUL5 291 aaKnown RBP23.19■■□□□ 1.3
PDF-201ENST00000288022 MYO18BQ8IUG5 2567 aa23.19■■□□□ 1.3
PDF-201ENST00000288022 CAPN14A8MX76 684 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 TFECO14948 347 aaPredicted RBP23.18■■□□□ 1.3
PDF-201ENST00000288022 WISP2O76076 250 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 CNR1P21554 472 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 SLC18A1P54219 525 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 PLGLB1Q02325 96 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 SRSF1Q07955 248 aaKnown RBP eCLIP23.18■■□□□ 1.3
PDF-201ENST00000288022 BST1Q10588 318 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 RNFT1Q5M7Z0 435 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 C6orf136Q5SQH8 315 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 SLC22A10Q63ZE4 541 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 HDXQ7Z353 690 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 PRR22Q8IZ63 422 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 KIRREL3Q8IZU9 778 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 LIX1Q8N485 282 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 C17orf47Q8NEP4 570 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 ARL8AQ96BM9 186 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 ERP27Q96DN0 273 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 GPR137Q96N19 417 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 FAM173AQ9BQD7 235 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 NXF5Q9H1B4 397 aaKnown RBP23.18■■□□□ 1.3
PDF-201ENST00000288022 SH3BP4Q9P0V3 963 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 NPFFR2Q9Y5X5 522 aa23.18■■□□□ 1.3
PDF-201ENST00000288022 A0A0G2JMM0 328 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 A0A1W2PPB8 328 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 A0A1W2PRS3 328 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 CLEC18AA5D8T8 446 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 KIR3DP1A8MWS1 328 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 PDPK1O15530 556 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 SEMA7AO75326 666 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 TMED10P49755 219 aaKnown RBP23.17■■□□□ 1.3
PDF-201ENST00000288022 EMDP50402 254 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 RBPJQ06330 500 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 KRTCAP3Q53RY4 240 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 CLEC18BQ6UXF7 455 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 GK5Q6ZS86 529 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 ZFP62Q8NB50 900 aaPredicted RBP23.17■■□□□ 1.3
PDF-201ENST00000288022 CLEC18CQ8NCF0 446 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 OR7G2Q8NG99 324 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 OR10G3Q8NGC4 313 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 LCORQ96JN0 433 aaPredicted RBP23.17■■□□□ 1.3
PDF-201ENST00000288022 GLIPR2Q9H4G4 154 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 ESPL1Q14674 2120 aa23.17■■□□□ 1.3
PDF-201ENST00000288022 PINLYPA6NC86 204 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 TP53I11O14683 189 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 HPCAL1P37235 193 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 PIGAP37287 484 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 DNASE1L1P49184 302 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 DCAF7P61962 342 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 NTRK2Q16620 822 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 PRAMEF20Q5VT98 475 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 IL23RQ5VWK5 629 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 TMEM107Q6UX40 140 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 SIAH3Q8IW03 269 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms