RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 R3HCC1LQ7Z5L2 792 aaKnown RBP18.38■□□□□ 0.53
TIMP4-201ENST00000287814 TMEM156Q8N614 296 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 SLC28A2O43868 658 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 PLOD3O60568 738 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 PRAMEF2O60811 474 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 GPX3P22352 226 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 MC3RP41968 323 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 C21orf58P58505 322 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 TMEM198Q66K66 360 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 TMEM107Q6UX40 140 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 LYPD8Q6UX82 237 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 IL20RBQ6UXL0 311 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 MDGA2Q7Z553 956 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 CISD2Q8N5K1 135 aaKnown RBP18.38■□□□□ 0.53
TIMP4-201ENST00000287814 COQ8BQ96D53 544 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 KLHL1Q9NR64 748 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 NTNG1Q9Y2I2 539 aa18.38■□□□□ 0.53
TIMP4-201ENST00000287814 NR0B1P51843 470 aaKnown RBP18.37■□□□□ 0.53
TIMP4-201ENST00000287814 TLE1Q04724 770 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 HSPB3Q12988 150 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 INPP5JQ15735 1006 aaPredicted RBP18.37■□□□□ 0.53
TIMP4-201ENST00000287814 ZNF766Q5HY98 468 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 NXNQ6DKJ4 435 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 TMEM64Q6YI46 380 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 ACTRT2Q8TDY3 377 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 ASB15Q8WXK1 588 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 SNRNP40Q96DI7 357 aaKnown RBP18.37■□□□□ 0.53
TIMP4-201ENST00000287814 ELP4Q96EB1 424 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 TEX37Q96LM6 180 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 ITPAQ9BY32 194 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 AIG1Q9NVV5 245 aa18.37■□□□□ 0.53
TIMP4-201ENST00000287814 TCP11X1B4DZS4 312 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 UPK1AO00322 258 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 PLOD2O00469 737 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 CDK2AP1O14519 115 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 DIAPH2O60879 1101 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 SP1P08047 785 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 CDK9P50750 372 aaKnown RBP18.36■□□□□ 0.53
TIMP4-201ENST00000287814 NME5P56597 212 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 LSM12Q3MHD2 195 aaKnown RBP18.36■□□□□ 0.53
TIMP4-201ENST00000287814 CPTPQ5TA50 214 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 SPATA19Q7Z5L4 167 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 ZNF605Q86T29 641 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 ERP27Q96DN0 273 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 SCMH1Q96GD3 660 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 MAGED4Q96JG8 741 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 EBF4Q9BQW3 602 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 NXF5Q9H1B4 397 aaKnown RBP18.36■□□□□ 0.53
TIMP4-201ENST00000287814 ACSS1Q9NUB1 689 aaPredicted RBP18.36■□□□□ 0.53
TIMP4-201ENST00000287814 GPR45Q9Y5Y3 372 aa18.36■□□□□ 0.53
TIMP4-201ENST00000287814 PRRC2CQ9Y520 2896 aaKnown RBP18.36■□□□□ 0.53
TIMP4-201ENST00000287814 EDF1O60869 148 aaKnown RBP18.35■□□□□ 0.53
TIMP4-201ENST00000287814 SLC25A12O75746 678 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 RPL3P39023 403 aaKnown RBP18.35■□□□□ 0.53
TIMP4-201ENST00000287814 IDH3AP50213 366 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 MANFP55145 182 aaKnown RBP18.35■□□□□ 0.53
TIMP4-201ENST00000287814 SRSF11Q05519 484 aaKnown RBP18.35■□□□□ 0.53
TIMP4-201ENST00000287814 NNATQ16517 81 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 RPUSD3Q6P087 351 aaKnown RBP18.35■□□□□ 0.53
TIMP4-201ENST00000287814 CYP4Z2PQ8N1L4 340 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 ARFGAP2Q8N6H7 521 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 TP53INP1Q96A56 240 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 ZBED6CLQ96FA7 236 aaPredicted RBP18.35■□□□□ 0.53
TIMP4-201ENST00000287814 MARK4Q96L34 752 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 TAAR6Q96RI8 345 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 DPY30Q9C005 99 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 TRIM4Q9C037 500 aa18.35■□□□□ 0.53
TIMP4-201ENST00000287814 C19orf53Q9UNZ5 99 aaPredicted RBP18.35■□□□□ 0.53
TIMP4-201ENST00000287814 A0A087WV62 115 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 A8MVJ9 347 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 AQP5P55064 265 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 UFM1P61960 85 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 GUCY1A3Q02108 690 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 ZNF791Q3KP31 576 aaPredicted RBP18.34■□□□□ 0.53
TIMP4-201ENST00000287814 HLA-DQA1Q5Y7H0 255 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 SLC25A25Q6KCM7 469 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 GALNTL5Q7Z4T8 443 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 CAMKMTQ7Z624 323 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 OR2L13Q8N349 312 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 CEP70Q8NHQ1 597 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 THOC1Q96FV9 657 aaKnown RBP18.34■□□□□ 0.53
TIMP4-201ENST00000287814 HPF1Q9NWY4 346 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 MAP10Q9P2G4 905 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 A0A1W2PRB8 838 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 DYNC1I1O14576 645 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 BCAS2O75934 225 aaPredicted RBP18.34■□□□□ 0.53
TIMP4-201ENST00000287814 TGDSO95455 350 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 PSMG1O95456 288 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 CD46P15529 392 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 IL12AP29459 219 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 WNT3P56703 355 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 PHC1P78364 1004 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 MAPKAPK3Q16644 382 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 PGS1Q32NB8 556 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 OPN5Q6U736 354 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 SLC15A4Q8N697 577 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 HORMAD2Q8N7B1 307 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 SLC22A8Q8TCC7 542 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 CPT1CQ8TCG5 803 aa18.34■□□□□ 0.53
TIMP4-201ENST00000287814 VSTM2LQ96N03 204 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms