RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 OR6T1Q8NGN1 323 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 SMPDL3AQ92484 453 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 UFD1Q92890 307 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 PPP1R3EQ9H7J1 279 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 ACAD8Q9UKU7 415 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 SHISA3A0PJX4 238 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 PDE9AO76083 593 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 METAP1P53582 386 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 B3GLCTQ6Y288 498 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 AP3S1Q92572 193 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 ZNF717Q9BY31 904 aaPredicted RBP25.96■■□□□ 1.75
CBX4-201ENST00000269397 MCUBQ9NWR8 336 aa25.96■■□□□ 1.75
CBX4-201ENST00000269397 FEZF1A0PJY2 475 aa25.95■■□□□ 1.75
CBX4-201ENST00000269397 ERP29P30040 261 aaKnown RBP25.95■■□□□ 1.75
CBX4-201ENST00000269397 CCT3P49368 545 aaKnown RBP25.95■■□□□ 1.75
CBX4-201ENST00000269397 GZMKP49863 264 aa25.95■■□□□ 1.75
CBX4-201ENST00000269397 COL9A2Q14055 689 aaPredicted RBP25.95■■□□□ 1.75
CBX4-201ENST00000269397 WSCD2Q2TBF2 565 aa25.95■■□□□ 1.75
CBX4-201ENST00000269397 C3orf38Q5JPI3 329 aa25.95■■□□□ 1.75
CBX4-201ENST00000269397 CEP78Q5JTW2 689 aa25.95■■□□□ 1.75
CBX4-201ENST00000269397 TCTE3Q8IZS6 198 aa25.95■■□□□ 1.75
CBX4-201ENST00000269397 DTX3Q8N9I9 347 aa25.95■■□□□ 1.75
CBX4-201ENST00000269397 VN1R2Q8NFZ6 395 aa25.95■■□□□ 1.75
CBX4-201ENST00000269397 RBFOX1Q9NWB1 397 aaKnown RBP25.95■■□□□ 1.75
CBX4-201ENST00000269397 CH25HO95992 272 aa25.95■■□□□ 1.74
CBX4-201ENST00000269397 NR2F1P10589 423 aa25.95■■□□□ 1.74
CBX4-201ENST00000269397 PRAMEF14Q5SWL7 426 aa25.95■■□□□ 1.74
CBX4-201ENST00000269397 PRAMEF13Q5VWM6 474 aa25.95■■□□□ 1.74
CBX4-201ENST00000269397 RFPL4BQ6ZWI9 263 aa25.95■■□□□ 1.74
CBX4-201ENST00000269397 DDX53Q86TM3 631 aaKnown RBP25.95■■□□□ 1.74
CBX4-201ENST00000269397 PEX5LQ8IYB4 626 aa25.95■■□□□ 1.74
CBX4-201ENST00000269397 IL17RCQ8NAC3 791 aa25.95■■□□□ 1.74
CBX4-201ENST00000269397 SENP5Q96HI0 755 aaPredicted RBP25.95■■□□□ 1.74
CBX4-201ENST00000269397 QRSL1Q9H0R6 528 aaKnown RBP25.95■■□□□ 1.74
CBX4-201ENST00000269397 OR51I1Q9H343 314 aa25.95■■□□□ 1.74
CBX4-201ENST00000269397 GSTK1Q9Y2Q3 226 aa25.95■■□□□ 1.74
CBX4-201ENST00000269397 LYRM1O43325 122 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 IFI30P13284 250 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 PRKAG1P54619 331 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 CTBP2P56545 445 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 KLHL22Q53GT1 634 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 GON7Q9BXV9 100 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 TRIM45Q9H8W5 580 aaPredicted RBP25.94■■□□□ 1.74
CBX4-201ENST00000269397 GALNT9Q9HCQ5 603 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 TEX10Q9NXF1 929 aaPredicted RBP25.94■■□□□ 1.74
CBX4-201ENST00000269397 C2orf92A0A1B0GVN3 265 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 STK25O00506 426 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 LIMS3P0CW19 117 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 LIMS4P0CW20 117 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 ACP2P11117 423 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 DDX5P17844 614 aaKnown RBP25.94■■□□□ 1.74
CBX4-201ENST00000269397 MTNR1AP48039 350 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 SLC6A11P48066 632 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 CDK5Q00535 292 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 TPBGQ13641 420 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 TMC8Q8IU68 726 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 TBC1D19Q8N5T2 526 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 FGF11Q92914 225 aa25.94■■□□□ 1.74
CBX4-201ENST00000269397 ZNF689Q96CS4 500 aaPredicted RBP25.94■■□□□ 1.74
CBX4-201ENST00000269397 MTCL1Q9Y4B5 1905 aaKnown RBP25.94■■□□□ 1.74
CBX4-201ENST00000269397 A0A1W2PRQ8 180 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 WASH3PC4AMC7 463 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 DVL2O14641 736 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 PQBP1O60828 265 aaKnown RBP25.93■■□□□ 1.74
CBX4-201ENST00000269397 ALPPL2P10696 532 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 P2RX3P56373 397 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 SMIM11AP58511 58 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 PPP3R1P63098 170 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 SREBF2Q12772 1141 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 ZNF658BQ4V348 819 aaPredicted RBP25.93■■□□□ 1.74
CBX4-201ENST00000269397 AMER3Q8N944 861 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 ANKRD53Q8N9V6 530 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 MED18Q9BUE0 208 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 ISM1B1AKI9 464 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 EPPINO95925 133 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 TYRP14679 529 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 BUD31P41223 144 aaPredicted RBP25.93■■□□□ 1.74
CBX4-201ENST00000269397 LHX8Q68G74 356 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 C11orf96Q7Z7L8 435 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 OR4F15Q8NGB8 312 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 OR4M1Q8NGD0 313 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 OR5AR1Q8NGP9 310 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 KIAA1143Q96AT1 154 aaPredicted RBP25.93■■□□□ 1.74
CBX4-201ENST00000269397 WACQ9BTA9 647 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 SAP130Q9H0E3 1048 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 CUEDC1Q9NWM3 386 aaPredicted RBP25.93■■□□□ 1.74
CBX4-201ENST00000269397 CNIH4Q9P003 139 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 HSPB11Q9Y547 144 aa25.93■■□□□ 1.74
CBX4-201ENST00000269397 TPD52L2O43399 206 aaKnown RBP25.92■■□□□ 1.74
CBX4-201ENST00000269397 PRKAR1AP10644 381 aa25.92■■□□□ 1.74
CBX4-201ENST00000269397 SMSP52788 366 aa25.92■■□□□ 1.74
CBX4-201ENST00000269397 EFNB1P98172 346 aa25.92■■□□□ 1.74
CBX4-201ENST00000269397 ALDH6A1Q02252 535 aaKnown RBP25.92■■□□□ 1.74
CBX4-201ENST00000269397 MORN4Q8NDC4 146 aa25.92■■□□□ 1.74
CBX4-201ENST00000269397 OR8D4Q8NGM9 314 aa25.92■■□□□ 1.74
CBX4-201ENST00000269397 ATF6BQ99941 703 aa25.92■■□□□ 1.74
CBX4-201ENST00000269397 PCDH10Q9P2E7 1040 aa25.92■■□□□ 1.74
CBX4-201ENST00000269397 KLHL21Q9UJP4 597 aa25.92■■□□□ 1.74
CBX4-201ENST00000269397 CLCA2Q9UQC9 943 aa25.92■■□□□ 1.74
CBX4-201ENST00000269397 ASF1AQ9Y294 204 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms