RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MAPK10P53779 464 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 IST1P53990 364 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 MAP4K2Q12851 820 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 MED21Q13503 144 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 SYT16Q17RD7 645 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 HEPHL1Q6MZM0 1159 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 DBX2Q6ZNG2 339 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 TMEM179BQ7Z7N9 219 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 ZDHHC13Q8IUH4 622 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 MARVELD2Q8N4S9 558 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 BBS10Q8TAM1 723 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 APOBEC4Q8WW27 367 aaKnown RBP15.32■□□□□ 0.04
TPM1-201ENST00000267996 GEMIN6Q8WXD5 167 aaKnown RBP15.32■□□□□ 0.04
TPM1-201ENST00000267996 NR1H4Q96RI1 486 aaPredicted RBP15.32■□□□□ 0.04
TPM1-201ENST00000267996 Q9H521 79 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 RUBCNLQ9H714 662 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 PRTFDC1Q9NRG1 225 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 THSD1Q9NS62 852 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 FGF21Q9NSA1 209 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 VNN3Q9NY84 501 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 NDUFAF4Q9P032 175 aa15.32■□□□□ 0.04
TPM1-201ENST00000267996 SEC16AO15027 2179 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 IGHV5-10-1A0A0J9YXX1 117 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 MYOCOSA0A1B0GUC4 107 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 DUXAA6NLW8 204 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 G3V2T6 193 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 CLDN4O14493 209 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 BMP10O95393 424 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 RECKO95980 971 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 AGR2O95994 175 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 CHRM4P08173 479 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 ETS2P15036 469 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 DUSP3P51452 185 aaPredicted RBP15.31■□□□□ 0.04
TPM1-201ENST00000267996 CRISP3P54108 245 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 ARSFP54793 590 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 HSD17B7P56937 341 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 DAG1Q14118 895 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 DUSP7Q16829 419 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 C6orf52Q5T4I8 152 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 ZCCHC12Q6PEW1 402 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 TTLL10Q6ZVT0 673 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 GPR135Q8IZ08 494 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 ST13P4Q8IZP2 240 aaPredicted RBP15.31■□□□□ 0.04
TPM1-201ENST00000267996 METTL27Q8N6F8 245 aaPredicted RBP15.31■□□□□ 0.04
TPM1-201ENST00000267996 SIMC1Q8NDZ2 872 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 GPR32P1Q8NGA4 272 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 IFI44Q8TCB0 444 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 SLC35A4Q96G79 324 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 TRNT1Q96Q11 434 aaKnown RBP15.31■□□□□ 0.04
TPM1-201ENST00000267996 ZNF607Q96SK3 696 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 GTPBP2Q9BX10 602 aaKnown RBP15.31■□□□□ 0.04
TPM1-201ENST00000267996 RBCK1Q9BYM8 510 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 ARRDC1-AS1Q9H2J1 176 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 EQTNQ9NQ60 294 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 GIN1Q9NXP7 522 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 USE1Q9NZ43 259 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 BAG5Q9UL15 447 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 CDC14AQ9UNH5 594 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 PCDHGB2Q9Y5G2 931 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 KMT2EQ8IZD2 1858 aa15.31■□□□□ 0.04
TPM1-201ENST00000267996 A0A0G2JPF8 293 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 HNRNPCL2B2RXH8 293 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 HNRNPCL3B7ZW38 293 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 DSCR3O14972 297 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 HYAL3O43820 417 aaPredicted RBP15.3■□□□□ 0.04
TPM1-201ENST00000267996 HPRP00739 348 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 ALPLP05186 524 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 CT62P0C5K7 136 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 HNRNPCL4P0DMR1 293 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 MAP3K8P41279 467 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 KCNJ5P48544 419 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 ALDH3A2P51648 485 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 SLC13A2Q13183 592 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 PLA2G2CQ5R387 149 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 SHQ1Q6PI26 577 aaKnown RBP15.3■□□□□ 0.04
TPM1-201ENST00000267996 DGAT2L6Q6ZPD8 337 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 STK32CQ86UX6 486 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 HIPK1Q86Z02 1210 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 SMYD1Q8NB12 490 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 SPPL2AQ8TCT8 520 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 TFAP2CQ92754 450 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 HOXB13Q92826 284 aaPredicted RBP15.3■□□□□ 0.04
TPM1-201ENST00000267996 GATA6Q92908 595 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 NRBF2Q96F24 287 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 OTUB1Q96FW1 271 aaPredicted RBP15.3■□□□□ 0.04
TPM1-201ENST00000267996 NDC1Q9BTX1 674 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 BTBD2Q9BX70 525 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 OSBPL10Q9BXB5 764 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 SMOC1Q9H4F8 434 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 CXorf21Q9HAI6 301 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 FANCEQ9HB96 536 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 LANCL2Q9NS86 450 aa15.3■□□□□ 0.04
TPM1-201ENST00000267996 MAGED1Q9Y5V3 778 aaPredicted RBP15.3■□□□□ 0.04
TPM1-201ENST00000267996 DSPPQ9NZW4 1301 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 KHNYNO15037 678 aaKnown RBP15.29■□□□□ 0.04
TPM1-201ENST00000267996 OR10H2O60403 315 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 SERPINB7O75635 380 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 DIRAS1O95057 198 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 ACP2P11117 423 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 S1PR1P21453 382 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms