RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 LAPTM4BQ86VI4 370 aa15.87■□□□□ 0.13
SQLE-201ENST00000265896 KIF18BQ86Y91 864 aa15.87■□□□□ 0.13
SQLE-201ENST00000265896 CREB3L4Q8TEY5 395 aa15.87■□□□□ 0.13
SQLE-201ENST00000265896 TFGQ92734 400 aaPredicted RBP15.87■□□□□ 0.13
SQLE-201ENST00000265896 COL26A1Q96A83 441 aa15.87■□□□□ 0.13
SQLE-201ENST00000265896 WACQ9BTA9 647 aa15.87■□□□□ 0.13
SQLE-201ENST00000265896 KATNB1Q9BVA0 655 aa15.87■□□□□ 0.13
SQLE-201ENST00000265896 SIRT3Q9NTG7 399 aaPredicted RBP15.87■□□□□ 0.13
SQLE-201ENST00000265896 CNOT2Q9NZN8 540 aaKnown RBP15.87■□□□□ 0.13
SQLE-201ENST00000265896 CSNK1G3Q9Y6M4 447 aa15.87■□□□□ 0.13
SQLE-201ENST00000265896 SPTBP11277 2137 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 F5P12259 2224 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 HYKKA2RU49 373 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 B4DXG7 233 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 PGRMC2O15173 223 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 PCCBP05166 539 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 C6P13671 934 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 SCN1BQ07699 218 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 SAXO2Q658L1 398 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 KRT73Q86Y46 540 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 OR8J1Q8NGP2 316 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 APOBEC4Q8WW27 367 aaKnown RBP15.86■□□□□ 0.13
SQLE-201ENST00000265896 SMPDL3AQ92484 453 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 HCN2Q9UL51 889 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 SH3D21A4FU49 640 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 EPPINO95925 133 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 ADAP00813 363 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 TP53P04637 393 aaPredicted RBP15.86■□□□□ 0.13
SQLE-201ENST00000265896 CSF2RAP15509 400 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 MYL12AP19105 171 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 ITGB8P26012 769 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 NCBP2P52298 156 aaKnown RBP eCLIP15.86■□□□□ 0.13
SQLE-201ENST00000265896 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.86■□□□□ 0.133e-7■□□□□ 10
SQLE-201ENST00000265896 MFSD4BQ5TF39 518 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 SLX4IPQ5VYV7 408 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 C19orf48Q6RUI8 117 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 TMEM107Q6UX40 140 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 VRK2Q86Y07 508 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 OR8D4Q8NGM9 314 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 PXYLP1Q8TE99 480 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 MTERF3Q96E29 417 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 FCRL4Q96PJ5 515 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 ZNF717Q9BY31 904 aaPredicted RBP15.86■□□□□ 0.13
SQLE-201ENST00000265896 SEC14L4Q9UDX3 406 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 OR1A2Q9Y585 309 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 IRAK3Q9Y616 596 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 NOTCH4Q99466 2003 aa15.86■□□□□ 0.13
SQLE-201ENST00000265896 DDCP20711 480 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 PXNP49023 591 aaPredicted RBP15.85■□□□□ 0.13
SQLE-201ENST00000265896 ERVFC1P60507 584 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 STXBP1P61764 594 aaKnown RBP15.85■□□□□ 0.13
SQLE-201ENST00000265896 ILKQ13418 452 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 SLC35F1Q5T1Q4 408 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 FAM27D1Q5T7N8 215 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 ZDHHC20Q5W0Z9 365 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 FCRLBQ6BAA4 426 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 CNIH2Q6PI25 160 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 C17orf64Q86WR6 236 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 OR8K5Q8NH50 307 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 BBS10Q8TAM1 723 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 VWCEQ96DN2 955 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 C6orf106Q9H6K1 298 aaPredicted RBP15.85■□□□□ 0.13
SQLE-201ENST00000265896 MED20Q9H944 212 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 B3GAT2Q9NPZ5 323 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 LHX9Q9NQ69 397 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 RPRD1BQ9NQG5 326 aaKnown RBP15.85■□□□□ 0.13
SQLE-201ENST00000265896 NDUFB11Q9NX14 153 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 A3GALT2U3KPV4 340 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 SERTM1A2A2V5 107 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 PRRT4C9JH25 899 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 SPINT1O43278 529 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 DPM1O60762 260 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 CHRM4P08173 479 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 PTX3P26022 381 aaPredicted RBP15.85■□□□□ 0.13
SQLE-201ENST00000265896 C21orf58P58505 322 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 CCDC58Q4VC31 144 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 PIP5KL1Q5T9C9 394 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 KHDRBS2Q5VWX1 349 aaKnown RBP15.85■□□□□ 0.13
SQLE-201ENST00000265896 PRICKLE2Q7Z3G6 844 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 FLCNQ8NFG4 579 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 SLC25A46Q96AG3 418 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 ZNF689Q96CS4 500 aaPredicted RBP15.85■□□□□ 0.13
SQLE-201ENST00000265896 CCDC32Q9BV29 185 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 SGPP1Q9BX95 441 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 CAPN10Q9HC96 672 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 CREBZFQ9NS37 354 aa15.85■□□□□ 0.13
SQLE-201ENST00000265896 DSPPQ9NZW4 1301 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 A0A1W2PPK0 400 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 OTOL1A6NHN0 477 aaPredicted RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 SSR2P43308 183 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 KCNJ5P48544 419 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 WDR5P61964 334 aaKnown RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 RHAGQ02094 409 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 CAMK1Q14012 370 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 TATDN3Q17R31 274 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 GRASPQ7Z6J2 395 aaPredicted RBP15.84■□□□□ 0.13
SQLE-201ENST00000265896 RASGRP3Q8IV61 690 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 YIPF7Q8N8F6 280 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 ARRDC3Q96B67 414 aa15.84■□□□□ 0.13
SQLE-201ENST00000265896 NUS1Q96E22 293 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms