RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 HOXB9P17482 250 aaPredicted RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 TCN1P20061 433 aaPredicted RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 MAGP20916 626 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 MSX2P35548 267 aaPredicted RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 AHRP35869 848 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 HPCAL1P37235 193 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 BCL6P41182 706 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 WNT3P56703 355 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 FOXD4Q12950 439 aaPredicted RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 BNIP2Q12982 314 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 ZIC1Q15915 447 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 PGS1Q32NB8 556 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 RABL3Q5HYI8 236 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 C6orf10Q5SRN2 563 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 ADCK2Q7Z695 626 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 GPR180Q86V85 440 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 FAM20CQ8IXL6 584 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 TBC1D19Q8N5T2 526 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 ACBD4Q8NC06 268 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 OR7A2PQ8NGA2 310 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 SLC26A7Q8TE54 656 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 C16orf78Q8WTQ4 265 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 NRGNQ92686 78 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 GFM2Q969S9 779 aaKnown RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 ZUFSPQ96AP4 578 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 COQ8BQ96D53 544 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 ZNF717Q9BY31 904 aaPredicted RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 SPRTNQ9H040 489 aaPredicted RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 PAIP1Q9H074 479 aaKnown RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 MUC13Q9H3R2 512 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 FAM120CQ9NX05 1096 aaKnown RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 VAPAQ9P0L0 249 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 ATP6V1HQ9UI12 483 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 AP3M1Q9Y2T2 418 aa12.43□□□□□ -0.42
SGCA-201ENST00000262018 WBP11Q9Y2W2 641 aaKnown RBP12.43□□□□□ -0.42
SGCA-201ENST00000262018 SAP18O00422 153 aaKnown RBP12.42□□□□□ -0.42
SGCA-201ENST00000262018 PLPP1O14494 284 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 HAT1O14929 419 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 NDUFS4O43181 175 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 DNAJA2O60884 412 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 STAMBPO95630 424 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 KLK1P06870 262 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 COX7A2P14406 83 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 ANPEPP15144 967 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 ACADSP16219 412 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 BSGP35613 385 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 RPL3P39023 403 aaKnown RBP12.42□□□□□ -0.42
SGCA-201ENST00000262018 GRIA3P42263 894 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 TRPC1P48995 793 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 GSK3BP49841 420 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 LIPEQ05469 1076 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 FXNQ16595 210 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 HKDC1Q2TB90 917 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 RUNDC3AQ59EK9 446 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 OR4F3Q6IEY1 312 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 FAM71E1Q6IPT2 247 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 KIRREL2Q6UWL6 708 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 NCCRP1Q6ZVX7 275 aaPredicted RBP12.42□□□□□ -0.42
SGCA-201ENST00000262018 IKBIPQ70UQ0 350 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 Q71RC1 249 aaPredicted RBP12.42□□□□□ -0.42
SGCA-201ENST00000262018 TMEM200AQ86VY9 491 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 PAQR7Q86WK9 346 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 PLD3Q8IV08 490 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 MSRB3Q8IXL7 192 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 MFSD9Q8NBP5 474 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 BHLHE22Q8NFJ8 381 aaPredicted RBP12.42□□□□□ -0.42
SGCA-201ENST00000262018 NACC2Q96BF6 587 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 QRFPRQ96P65 431 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 F2RL3Q96RI0 385 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 FOXC2Q99958 501 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 REXO4Q9GZR2 422 aaKnown RBP12.42□□□□□ -0.42
SGCA-201ENST00000262018 PCDHAC1Q9H158 963 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 CXXC4Q9H2H0 198 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 REEP4Q9H6H4 257 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 SLC25A37Q9NYZ2 338 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 GMPR2Q9P2T1 348 aaKnown RBP12.42□□□□□ -0.42
SGCA-201ENST00000262018 ADAM29Q9UKF5 820 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 EXO1Q9UQ84 846 aaKnown RBP12.42□□□□□ -0.42
SGCA-201ENST00000262018 HS3ST3B1Q9Y662 390 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 NUP210LQ5VU65 1888 aa12.42□□□□□ -0.42
SGCA-201ENST00000262018 JMJD1CQ15652 2540 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 GABRR3A8MPY1 467 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 RASAL1O95294 804 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 C8BP07358 591 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 PIM1P11309 404 aaPredicted RBP12.41□□□□□ -0.42
SGCA-201ENST00000262018 TPP2P29144 1249 aaPredicted RBP12.41□□□□□ -0.42
SGCA-201ENST00000262018 PTPN6P29350 595 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 GSTM5P46439 218 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 PTDSS1P48651 473 aaKnown RBP12.41□□□□□ -0.42
SGCA-201ENST00000262018 ERFP50548 548 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 TNFSF10P50591 281 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 ARFIP1P53367 373 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 PDE7AQ13946 482 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 DEFB110Q30KQ9 67 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 ADPRMQ3LIE5 342 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 TMEM35AQ53FP2 167 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 CPTPQ5TA50 214 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 FIGLAQ6QHK4 219 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 PAGE2Q7Z2X7 111 aa12.41□□□□□ -0.42
SGCA-201ENST00000262018 R3HCC1LQ7Z5L2 792 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms