RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 NOXA1Q86UR1 476 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 NLGN4YQ8NFZ3 816 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 PPIL1Q9Y3C6 166 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 NPC1O15118 1278 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 OLFM2O95897 454 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 CXCR2P25025 360 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 MTNR1AP48039 350 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 TM4SF4P48230 202 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 WNT4P56705 351 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 SRP54P61011 504 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 MLLT11Q13015 90 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 UNC5DQ6UXZ4 953 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 ABI3BPQ7Z7G0 1075 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 ZER1Q7Z7L7 766 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 NLRP8Q86W28 1048 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 VWA5B2Q8N398 1253 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 CXorf40AQ8TE69 158 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 C11orf24Q96F05 449 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 ENTPD4Q9Y227 616 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 HCFC2Q9Y5Z7 792 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 PAICSP22234 425 aaKnown RBP15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 MAPK9P45984 424 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 GPR4P46093 362 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 MAP2K3P46734 347 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 TJAP1Q5JTD0 557 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 SLC35F1Q5T1Q4 408 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 HSPB11Q9Y547 144 aa15.3■□□□□ 0.04
SNCAIP-202ENST00000261368 LOC102723532A0A0G2JNH3 316 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 HMGN4O00479 90 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 ERI3O43414 337 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 SEMA3DO95025 777 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 CSF3P09919 207 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 SOX18P35713 384 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 CCR8P51685 355 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 PCBP3P57721 371 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 GPR50Q13585 617 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 INSL4Q14641 139 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 FAM46CQ5VWP2 391 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 SLC27A4Q6P1M0 643 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 HSDL2Q6YN16 418 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 FAM83HQ6ZRV2 1179 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 ZNF614Q8N883 585 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 GOT1L1Q8NHS2 421 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 NEIL3Q8TAT5 605 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 SETD6Q8TBK2 473 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 RASSF5Q8WWW0 418 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 TM4SF18Q96CE8 201 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 ZNF582Q96NG8 517 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 IRAK3Q9Y616 596 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 V9GYH0 126 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 SERTM1A2A2V5 107 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 HMX3A6NHT5 357 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 FAM183AA6NL82 134 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 NDUFS4O43181 175 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 MMP12P39900 470 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 RGS8P57771 180 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 GPR19Q15760 415 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 TATDN3Q17R31 274 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 ZNF311Q5JNZ3 666 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 PLEKHM3Q6ZWE6 761 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 DPPA4Q7L190 304 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 ZNF438Q7Z4V0 828 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 JPH3Q8WXH2 748 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 RGMAQ96B86 450 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 ST6GAL2Q96JF0 529 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 TMEM245Q9H330 911 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 CDK10Q15131 360 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 TMEM107Q6UX40 140 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 GDPGP1Q6ZNW5 385 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 AMER3Q8N944 861 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 OR8K5Q8NH50 307 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 SLC7A6Q92536 515 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 NEURL3Q96EH8 262 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 DTD2Q96FN9 168 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 DPH7Q9BTV6 452 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 TTTY10Q9BZA0 68 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 NDRG2Q9UN36 371 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 CSNK1G3Q9Y6M4 447 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 AP1M2Q9Y6Q5 423 aa15.29■□□□□ 0.04
SNCAIP-202ENST00000261368 TMPRSS11DO60235 418 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 ACP5P13686 325 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 HTR2BP41595 481 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 KCNJ5P48544 419 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 HMGA2P52926 109 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 EEF1A2Q05639 463 aaKnown RBP15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 NDUFAF5Q5TEU4 345 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 XKRXQ6PP77 449 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 ANKK1Q8NFD2 765 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 OR51G2Q8NGK0 314 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 SPATA5L1Q9BVQ7 753 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 SAP130Q9H0E3 1048 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 REV1Q9UBZ9 1251 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 TALDO1P37837 337 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 SNRPGP62308 76 aaKnown RBP15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 BTBD16Q32M84 506 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 TCEAL5Q5H9L2 206 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 KLBQ86Z14 1044 aa15.28■□□□□ 0.04
SNCAIP-202ENST00000261368 LAS2Q8IYD9 372 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms