RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 ZNF582Q96NG8 517 aaPredicted RBP12.51□□□□□ -0.41
PGBD1-201ENST00000259883 BBS4Q96RK4 519 aa12.51□□□□□ -0.41
PGBD1-201ENST00000259883 EFCAB11Q9BUY7 163 aa12.51□□□□□ -0.41
PGBD1-201ENST00000259883 KATNB1Q9BVA0 655 aa12.51□□□□□ -0.41
PGBD1-201ENST00000259883 SERHL2Q9H4I8 314 aa12.51□□□□□ -0.41
PGBD1-201ENST00000259883 RETREG1Q9H6L5 497 aa12.51□□□□□ -0.41
PGBD1-201ENST00000259883 RNF121Q9H920 327 aa12.51□□□□□ -0.41
PGBD1-201ENST00000259883 MED20Q9H944 212 aa12.51□□□□□ -0.41
PGBD1-201ENST00000259883 CNOT2Q9NZN8 540 aaKnown RBP12.51□□□□□ -0.41
PGBD1-201ENST00000259883 CEP290O15078 2479 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 HYKKA2RU49 373 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SH3D21A4FU49 640 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 ADAP00813 363 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SYPP08247 313 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 IL12RB1P42701 662 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SSR2P43308 183 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 GIPRP48546 466 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 PRLHRP49683 370 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 TAS2R41P59536 307 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 GALK2Q01415 458 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 RAB33AQ14088 237 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 WSCD2Q2TBF2 565 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 IDNKQ5T6J7 187 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 FAM27D1Q5T7N8 215 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SLC9B2Q86UD5 537 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 CREB3L4Q8TEY5 395 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 IRF7Q92985 503 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 CDCP1Q9H5V8 836 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 TMEM38AQ9H6F2 299 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 KLHL1Q9NR64 748 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 PLEKHB1Q9UF11 243 aaPredicted RBP12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SRRDQ9UH36 339 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 LSM2Q9Y333 95 aaKnown RBP12.5□□□□□ -0.41
PGBD1-201ENST00000259883 ALG5Q9Y673 324 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 PLXNB3Q9ULL4 1909 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 RB1P06400 928 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 HSD3B1P14060 373 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SYN1P17600 705 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 HSD3B2P26439 372 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SRP54P61011 504 aaKnown RBP12.5□□□□□ -0.41
PGBD1-201ENST00000259883 STXBP1P61764 594 aaKnown RBP12.5□□□□□ -0.41
PGBD1-201ENST00000259883 MLIPQ5VWP3 458 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 HSDL2Q6YN16 418 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 C17orf64Q86WR6 236 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 CPA6Q8N4T0 437 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 PLA2G15Q8NCC3 412 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 C17orf50Q8WW18 174 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SMPDL3AQ92484 453 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 FCRL4Q96PJ5 515 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 TRIM45Q9H8W5 580 aaPredicted RBP12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SLC25A19Q9HC21 320 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 B3GAT2Q9NPZ5 323 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 SLC13A4Q9UKG4 626 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 MAU2Q9Y6X3 613 aa12.5□□□□□ -0.41
PGBD1-201ENST00000259883 NPIPB8E9PQR5 432 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 SLC30A4O14863 429 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 MPZL2O60487 215 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 CXCL14O95715 111 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 RAB36O95755 333 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 PCCBP05166 539 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 GNSP15586 552 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 LIMS1P48059 325 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 KLHL12Q53G59 568 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 PIP5KL1Q5T9C9 394 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 PLPP4Q5VZY2 271 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF730Q6ZMV8 503 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 DNAJC5GQ8N7S2 189 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 SLC35G5Q96KT7 338 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 ZSWIM3Q96MP5 696 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 MYNNQ9NPC7 610 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 SLC23A2Q9UGH3 650 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 A3GALT2U3KPV4 340 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 HEATR5BQ9P2D3 2071 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 ERVH48-1M5A8F1 160 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 EIF2S1P05198 315 aaKnown RBP12.49□□□□□ -0.41
PGBD1-201ENST00000259883 MRPL3P09001 348 aaKnown RBP12.49□□□□□ -0.41
PGBD1-201ENST00000259883 CTSAP10619 480 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 DDX5P17844 614 aaKnown RBP12.49□□□□□ -0.41
PGBD1-201ENST00000259883 PTX3P26022 381 aaPredicted RBP12.49□□□□□ -0.41
PGBD1-201ENST00000259883 WDR5P61964 334 aaKnown RBP12.49□□□□□ -0.41
PGBD1-201ENST00000259883 RHAGQ02094 409 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 KCNC3Q14003 757 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 CAMK1Q14012 370 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 LCN1P1Q5VSP4 162 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 SLX4IPQ5VYV7 408 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 TMEM107Q6UX40 140 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 VRK2Q86Y07 508 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 KLBQ86Z14 1044 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF547Q8IVP9 402 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 TCEAL8Q8IYN2 117 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 OR51G2Q8NGK0 314 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 TFGQ92734 400 aaPredicted RBP12.49□□□□□ -0.41
PGBD1-201ENST00000259883 ZNF607Q96SK3 696 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 IMP3Q9NV31 184 aaKnown RBP12.49□□□□□ -0.41
PGBD1-201ENST00000259883 NDUFB11Q9NX14 153 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 PCDHGB2Q9Y5G2 931 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 IRAK3Q9Y616 596 aa12.49□□□□□ -0.41
PGBD1-201ENST00000259883 SHISA3A0PJX4 238 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms