RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 TFECO14948 347 aaPredicted RBP16.05■□□□□ 0.16
FOXA1-201ENST00000250448 SLC16A8O95907 504 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 FEN1P39748 380 aaKnown RBP16.05■□□□□ 0.16
FOXA1-201ENST00000250448 TGM4P49221 684 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 ADPRHP54922 357 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 CDK3Q00526 305 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 LARS2Q15031 903 aaKnown RBP16.05■□□□□ 0.16
FOXA1-201ENST00000250448 FAM83HQ6ZRV2 1179 aaPredicted RBP16.05■□□□□ 0.16
FOXA1-201ENST00000250448 FAM181AQ8N9Y4 354 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 NEIL2Q969S2 332 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 PKP4Q99569 1192 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 NRTNQ99748 197 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 TTYH2Q9BSA4 534 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 UCK2Q9BZX2 261 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 MMP28Q9H239 520 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 SLC23A2Q9UGH3 650 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 CA5BQ9Y2D0 317 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 KLHL20Q9Y2M5 609 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 OSMP13725 252 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 DRD1P21728 446 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 PNLIPRP1P54315 467 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 SCN1BQ07699 218 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 C2orf80Q0P641 193 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 HYAL2Q12891 473 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 SLCO4C1Q6ZQN7 724 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 TRMT11Q7Z4G4 463 aaKnown RBP16.05■□□□□ 0.16
FOXA1-201ENST00000250448 FAM3CQ92520 227 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 REPS1Q96D71 796 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 MRGPRX1Q96LB2 322 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 SLC22A4Q9H015 551 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 REV1Q9UBZ9 1251 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 WWP2O00308 870 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 TPST2O60704 377 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 RNGTTO60942 597 aaKnown RBP16.05■□□□□ 0.16
FOXA1-201ENST00000250448 SOX14O95416 240 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 RPL3P39023 403 aaKnown RBP16.05■□□□□ 0.16
FOXA1-201ENST00000250448 ZNF91Q05481 1191 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 ASAH1Q13510 395 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 WDR48Q8TAF3 677 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 C16orf78Q8WTQ4 265 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 CDX2Q99626 313 aaPredicted RBP16.05■□□□□ 0.16
FOXA1-201ENST00000250448 C2orf42Q9NWW7 574 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 NDOR1Q9UHB4 597 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 SNX7Q9UNH6 387 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 SSR3Q9UNL2 185 aa16.05■□□□□ 0.16
FOXA1-201ENST00000250448 FFAR1O14842 300 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 HBQ1P09105 142 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 NDUFV2P19404 249 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 LIM2P55344 173 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 NCF4Q15080 339 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 DUSP7Q16829 419 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 SLC30A8Q8IWU4 369 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 OR9Q1Q8NGQ5 310 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 SLC7A6Q92536 515 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 RNF170Q96K19 258 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 SLC6A18Q96N87 628 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 ZCCHC2Q9C0B9 1178 aaKnown RBP16.04■□□□□ 0.16
FOXA1-201ENST00000250448 POLR2J2Q9GZM3 115 aaKnown RBP16.04■□□□□ 0.16
FOXA1-201ENST00000250448 PLSCR3Q9NRY6 295 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 PAQR5Q9NXK6 330 aaPredicted RBP16.04■□□□□ 0.16
FOXA1-201ENST00000250448 TMCC3Q9ULS5 477 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 KCNE2Q9Y6J6 123 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 CCDC88CQ9P219 2028 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 SAP18O00422 153 aaKnown RBP16.04■□□□□ 0.16
FOXA1-201ENST00000250448 NPC1O15118 1278 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 IGFBP1P08833 259 aaPredicted RBP16.04■□□□□ 0.16
FOXA1-201ENST00000250448 ACSL1P33121 698 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 DSTNP60981 165 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 SGCGQ13326 291 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 E2F2Q14209 437 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 C12orf73Q69YU5 71 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 FAM131AQ6UXB0 335 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 FAM92BQ6ZTR7 304 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 NANOGP1Q8N7R0 232 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 HMGB4Q8WW32 186 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 C8orf33Q9H7E9 229 aaPredicted RBP16.04■□□□□ 0.16
FOXA1-201ENST00000250448 MYNNQ9NPC7 610 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 MOSPD1Q9UJG1 213 aa16.04■□□□□ 0.16
FOXA1-201ENST00000250448 RPL36Q9Y3U8 105 aaKnown RBP16.04■□□□□ 0.16
FOXA1-201ENST00000250448 TCRBV21S2A2A0A5A6 115 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 IL9P15248 144 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 DAB2P98082 770 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 MXD1Q05195 221 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 MLLT11Q13015 90 aaPredicted RBP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 ILKQ13418 452 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 TSTA3Q13630 321 aaPredicted RBP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 SLBPQ14493 270 aaKnown RBP eCLIP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 PUM1Q14671 1186 aaKnown RBP eCLIP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 PRSS53Q2L4Q9 553 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 GLYR1Q49A26 553 aaPredicted RBP16.03■□□□□ 0.16
FOXA1-201ENST00000250448 FAM71E1Q6IPT2 247 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 C11orf96Q7Z7L8 435 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 COX14Q96I36 57 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 TSSK6Q9BXA6 273 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 DMRT3Q9NQL9 472 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 WDR70Q9NW82 654 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 CA14Q9ULX7 337 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 SNX11Q9Y5W9 270 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 MAU2Q9Y6X3 613 aa16.03■□□□□ 0.16
FOXA1-201ENST00000250448 TMEM265A0A087WTH1 108 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms