RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ZNF860A6NHJ4 632 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 CHRM4P08173 479 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 GADD45AP24522 165 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 ELAVL4P26378 380 aaKnown RBP14.87□□□□□ -0.03
LRFN1-201ENST00000248668 LIMS1P48059 325 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 OLR1P78380 273 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 HOXC5Q00444 222 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 ID2Q02363 134 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 AMIGO1Q86WK6 493 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 DNAJC5GQ8N7S2 189 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.87□□□□□ -0.03
LRFN1-201ENST00000248668 APOBEC4Q8WW27 367 aaKnown RBP14.87□□□□□ -0.03
LRFN1-201ENST00000248668 ZNF607Q96SK3 696 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 WDR70Q9NW82 654 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 CLEC1BQ9P126 229 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 ASB4Q9Y574 426 aa14.87□□□□□ -0.03
LRFN1-201ENST00000248668 CNTRLQ7Z7A1 2325 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 EFCAB9A8MZ26 197 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 M0R082 166 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 H1F0P07305 194 aaKnown RBP14.86□□□□□ -0.03
LRFN1-201ENST00000248668 MAGP20916 626 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 ENDOUP21128 410 aaKnown RBP14.86□□□□□ -0.03
LRFN1-201ENST00000248668 CTHP32929 405 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 TGFBR2P37173 567 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 CRISP1P54107 249 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 CDC42P60953 191 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 FRMPD2BQ6IN97 320 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 SIMC1Q8NDZ2 872 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 SUN3Q8TAQ9 357 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 SLC7A13Q8TCU3 470 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 CLDND1Q9NY35 253 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 ENTPD4Q9Y227 616 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 PMF1-BGLAPU3KQ54 211 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 GPR89AB7ZAQ6 455 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 DNAJB6O75190 326 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 GPR89BP0CG08 455 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 ACADMP11310 421 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 ACVR2AP27037 513 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 CMPK1P30085 196 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 KCNJ5P48544 419 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 SH3YL1Q96HL8 342 aaPredicted RBP14.86□□□□□ -0.03
LRFN1-201ENST00000248668 C1QTNF7Q9BXJ2 289 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 ITPAQ9BY32 194 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 NT5DC2Q9H857 520 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 AP1M2Q9Y6Q5 423 aa14.86□□□□□ -0.03
LRFN1-201ENST00000248668 GSAPA4D1B5 854 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ZW10O43264 779 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 CDK1P06493 297 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 CHRM5P08912 532 aaPredicted RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 PPP2R1BP30154 601 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 GRK5P34947 590 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 FRKP42685 505 aaPredicted RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 NR4A2P43354 598 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ELOAQ14241 798 aaKnown RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 AGERQ15109 404 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 MED22Q15528 200 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 PRR23CQ6ZRP0 262 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 OR2L5Q8NG80 312 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 OR6T1Q8NGN1 323 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 MYDGFQ969H8 173 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 MRPL38Q96DV4 380 aaKnown RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ZHX1-C8orf76Q96EF9 292 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ZNF354BQ96LW1 612 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ACSS1Q9NUB1 689 aaPredicted RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ZNF624Q9P2J8 865 aaPredicted RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 MSRAQ9UJ68 235 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 EIF2S1P05198 315 aaKnown RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 DBTP11182 482 aaKnown RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 SERPINB1P30740 379 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ZNF761Q86XN6 746 aaPredicted RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 DEPDC4Q8N2C3 294 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ZNF675Q8TD23 568 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 OR5M11Q96RB7 305 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 SRMSQ9H3Y6 488 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 URB1O60287 2271 aaKnown RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 TICRRQ7Z2Z1 1910 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 E9PQ18 207 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 SLC22A1O15245 554 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 PRICKLE3O43900 615 aaPredicted RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 AIREO43918 545 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 UGT2B17O75795 530 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ZNF888P0CJ79 500 aaPredicted RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 GABRB1P18505 474 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 POLR2CP19387 275 aaPredicted RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 HMGA2P52926 109 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 FUT5Q11128 374 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ZIC1Q15915 447 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 DEFB134Q4QY38 66 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 PRRT3Q5FWE3 981 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ZNF770Q6IQ21 691 aaPredicted RBP14.85□□□□□ -0.03
LRFN1-201ENST00000248668 TTLQ8NG68 377 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 SIGLEC11Q96RL6 698 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 OR51E2Q9H255 320 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 FTSJ1Q9UET6 329 aa14.85□□□□□ -0.03
LRFN1-201ENST00000248668 ANKRD34BA5PLL1 514 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 PDE9AO76083 593 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 ADORA3P0DMS8 318 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 DRD2P14416 443 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 TNFRSF4P43489 277 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 CDCA3Q99618 268 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms