RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 POLR1CO15160 346 aaPredicted RBP15.95■□□□□ 0.14
SGPP1-201ENST00000247225 SLCO2B1O94956 709 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 ALDH1A1P00352 501 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 LALBAP00709 142 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 TIMP2P16035 220 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 PRPH2P23942 346 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 SRP9P49458 86 aaKnown RBP15.95■□□□□ 0.14
SGPP1-201ENST00000247225 CLDN2P57739 230 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 OR4N4Q8N0Y3 316 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 ECHDC3Q96DC8 303 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 ZNF582Q96NG8 517 aaPredicted RBP15.95■□□□□ 0.14
SGPP1-201ENST00000247225 REV1Q9UBZ9 1251 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 SCN3AQ9NY46 2000 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 A0A075B6Q4 140 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 PAHP00439 452 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 PTPN2P17706 415 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 PTX3P26022 381 aaPredicted RBP15.95■□□□□ 0.14
SGPP1-201ENST00000247225 VIPR1P32241 457 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 STXBP1P61764 594 aaKnown RBP15.95■□□□□ 0.14
SGPP1-201ENST00000247225 NTHL1P78549 312 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 FAPQ12884 760 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.95■□□□□ 0.14
SGPP1-201ENST00000247225 FAM26DQ5JW98 314 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 BBS1Q8NFJ9 593 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 ZNF607Q96SK3 696 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 ASAH2Q9NR71 780 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 ING3Q9NXR8 418 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 EXTL2Q9UBQ6 330 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 MAPRE3Q9UPY8 281 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 HCFC2Q9Y5Z7 792 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 SCN2AQ99250 2005 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 F5P12259 2224 aa15.95■□□□□ 0.14
SGPP1-201ENST00000247225 A0A0X1KG70 313 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 INMT-MINDY4F8WBC2 141 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 BTN3A3O00478 584 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 RECKO95980 971 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 ADAP00813 363 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 SSR2P43308 183 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 NCBP2P52298 156 aaKnown RBP eCLIP15.94■□□□□ 0.149e-7■□□□□ 10
SGPP1-201ENST00000247225 WDR5P61964 334 aaKnown RBP15.94■□□□□ 0.14
SGPP1-201ENST00000247225 RHAGQ02094 409 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 PRAMEF14Q5SWL7 426 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 PRAMEF13Q5VWM6 474 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 FAM71E1Q6IPT2 247 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 METTL2BQ6P1Q9 378 aaKnown RBP15.94■□□□□ 0.14
SGPP1-201ENST00000247225 NXPE4Q6UWF7 544 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 SYT9Q86SS6 491 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 LRRTM4Q86VH4 590 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 PROKR2Q8NFJ6 384 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 TDP1Q9NUW8 608 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 H3BSH0 61 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 RGS13O14921 159 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 LYRM1O43325 122 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 ALX3O95076 343 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 FUT1P19526 365 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 UQCRC2P22695 453 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 CDH11P55287 796 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 KRT33BQ14525 404 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 MZT2BQ6NZ67 158 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 XKRXQ6PP77 449 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 OR9A1PQ8NGU1 263 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 TEFMQ96QE5 360 aaKnown RBP15.94■□□□□ 0.14
SGPP1-201ENST00000247225 SECISBP2Q96T21 854 aaKnown RBP15.94■□□□□ 0.14
SGPP1-201ENST00000247225 TAPBPLQ9BX59 468 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 SAP130Q9H0E3 1048 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 OR51V1Q9H2C8 321 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 BRF2Q9HAW0 419 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 B3GAT2Q9NPZ5 323 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 THSD1Q9NS62 852 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 MGAT4BQ9UQ53 548 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 ASCC3Q8N3C0 2202 aaKnown RBP15.94■□□□□ 0.14
SGPP1-201ENST00000247225 FAM170BA6NMN3 283 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 CENPBD1B2RD01 187 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 PLPP1O14494 284 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 GREM1O60565 184 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 NOS1APO75052 506 aaPredicted RBP15.94■□□□□ 0.14
SGPP1-201ENST00000247225 SERPINI2O75830 405 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 GNSP15586 552 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 MTNR1AP48039 350 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 SLC3A1Q07837 685 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 ARL9Q6T311 187 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 CD99L2Q8TCZ2 262 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 TRIM63Q969Q1 353 aa15.94■□□□□ 0.14
SGPP1-201ENST00000247225 PPIL3Q9H2H8 161 aaKnown RBP15.94■□□□□ 0.14
SGPP1-201ENST00000247225 ARID1AO14497 2285 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 A0A0G2JMP0 313 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 EEF1E1O43324 174 aaKnown RBP15.93■□□□□ 0.14
SGPP1-201ENST00000247225 REM1O75628 298 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 CRYZL1O95825 349 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 PPP2R1BP30154 601 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 ETV6P41212 452 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 WNT4P56705 351 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 ILKQ13418 452 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 C9orf64Q5T6V5 341 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 PIP5KL1Q5T9C9 394 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 C17orf64Q86WR6 236 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 TMEM145Q8NBT3 493 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 OR4M2Q8NGB6 313 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 QRFPRQ96P65 431 aa15.93■□□□□ 0.14
SGPP1-201ENST00000247225 GBF1Q92538 1859 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms