RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 GSSP48637 474 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 VBP1P61758 197 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 ILF3Q12906 894 aaKnown RBP eCLIP11.97□□□□□ -0.49
SNAI1-201ENST00000244050 TP53BP2Q13625 1128 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 IRF3Q14653 427 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 ZNF846Q147U1 533 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 ABHD17CQ6PCB6 329 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 WASH2PQ6VEQ5 465 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 TAGAPQ8N103 731 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 SLC22A18ASQ8N1D0 253 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 ZBTB44Q8NCP5 570 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 SRFBP1Q8NEF9 429 aaKnown RBP11.97□□□□□ -0.49
SNAI1-201ENST00000244050 OR2L3Q8NG85 312 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 NDNFQ8TB73 568 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 SFXN5Q8TD22 340 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 S100ZQ8WXG8 99 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 UCN3Q969E3 161 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 GTPBP3Q969Y2 492 aaKnown RBP11.97□□□□□ -0.49
SNAI1-201ENST00000244050 CLDN23Q96B33 292 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 CRELD1Q96HD1 420 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 SLC35G5Q96KT7 338 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 WDR12Q9GZL7 423 aaKnown RBP11.97□□□□□ -0.49
SNAI1-201ENST00000244050 OR51I1Q9H343 314 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 KLHL31Q9H511 634 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 KIR3DX1Q9H7L2 352 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 ANKHQ9HCJ1 492 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 BCL2L10Q9HD36 194 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 AKIP1Q9NQ31 210 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 FBXO8Q9NRD0 319 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 TRNAU1APQ9NX07 287 aaKnown RBP11.97□□□□□ -0.49
SNAI1-201ENST00000244050 IMPAD1Q9NX62 359 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 NDOR1Q9UHB4 597 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 MGAT4BQ9UQ53 548 aa11.97□□□□□ -0.49
SNAI1-201ENST00000244050 hCG_2014768A0A024R1R8 64 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 TRBV4-1A0A0J9YWV2 114 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 A0A1W2PPC4 97 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 PRAMEF27A3QJZ7 478 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 M0R082 166 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 FAAHO00519 579 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 HAT1O14929 419 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 LAMTOR5O43504 91 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 SLC28A2O43868 658 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 SEMA7AO75326 666 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 H1F0P07305 194 aaKnown RBP11.96□□□□□ -0.5
SNAI1-201ENST00000244050 THEGLP0DJG4 465 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 OR12D1P0DN82 309 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 POU2F1P14859 743 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 HIST1H1TP22492 207 aaPredicted RBP11.96□□□□□ -0.5
SNAI1-201ENST00000244050 NDUFS1P28331 727 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 UGT2B10P36537 528 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 CTSKP43235 329 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 ANXA11P50995 505 aaKnown RBP11.96□□□□□ -0.5
SNAI1-201ENST00000244050 SLAMF1Q13291 335 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 ILKQ13418 452 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 NR1D2Q14995 579 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 DCST1Q5T197 706 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 BHLHB9Q6PI77 547 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 DGLUCYQ7Z3D6 616 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 SLC44A2Q8IWA5 706 aaPredicted RBP11.96□□□□□ -0.5
SNAI1-201ENST00000244050 MFSD9Q8NBP5 474 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 OR2L5Q8NG80 312 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 C9orf43Q8TAL5 461 aaPredicted RBP11.96□□□□□ -0.5
SNAI1-201ENST00000244050 TREX2Q9BQ50 279 aaPredicted RBP11.96□□□□□ -0.5
SNAI1-201ENST00000244050 FUZQ9BT04 418 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 HMG20AQ9NP66 347 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 SEMA3GQ9NS98 782 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 CNOT2Q9NZN8 540 aaKnown RBP11.96□□□□□ -0.5
SNAI1-201ENST00000244050 RHCGQ9UBD6 479 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 REV1Q9UBZ9 1251 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 SEC14L3Q9UDX4 400 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 PCOLCE2Q9UKZ9 415 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 SNX7Q9UNH6 387 aa11.96□□□□□ -0.5
SNAI1-201ENST00000244050 A0A0G2JN53 185 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 A0A1W2PR48 441 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 EFCAB10A6NFE3 127 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 J3QRK9 145 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 ERI3O43414 337 aaKnown RBP11.95□□□□□ -0.5
SNAI1-201ENST00000244050 OSMP13725 252 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 F3P13726 295 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 ATP5A1P25705 553 aaKnown RBP11.95□□□□□ -0.5
SNAI1-201ENST00000244050 ELAVL4P26378 380 aaKnown RBP11.95□□□□□ -0.5
SNAI1-201ENST00000244050 CMPK1P30085 196 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 PEBP1P30086 187 aaKnown RBP11.95□□□□□ -0.5
SNAI1-201ENST00000244050 PPP2R1BP30154 601 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 GPC1P35052 558 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 LIPAP38571 399 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 KHKP50053 298 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 NCBP2P52298 156 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNAI1-201ENST00000244050 NCS1P62166 190 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 TUBA1BP68363 451 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 CSTF1Q05048 431 aaKnown RBP11.95□□□□□ -0.5
SNAI1-201ENST00000244050 GNA13Q14344 377 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 TIGD6Q17RP2 521 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 PRAMEF8Q5VWM4 474 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 PRAMEF7Q5VXH5 474 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 ZNF425Q6IV72 752 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 TUBA1AQ71U36 451 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 ZBTB46Q86UZ6 589 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 KRT73Q86Y46 540 aa11.95□□□□□ -0.5
SNAI1-201ENST00000244050 STX19Q8N4C7 294 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms