RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 GPX3P22352 226 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 IL12AP29459 219 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 NTSP30990 170 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 HPCAL1P37235 193 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 SOX3P41225 446 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 MC3RP41968 323 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 CDK9P50750 372 aaKnown RBP13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 SSR4P51571 173 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 NR0B1P51843 470 aaKnown RBP13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 AQP5P55064 265 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 MLLT10P55197 1068 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 PHC1P78364 1004 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 HSPB3Q12988 150 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 ZNF169Q14929 603 aaPredicted RBP13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 TLR1Q15399 786 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 OR1C1Q15619 314 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 CPTPQ5TA50 214 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 C6orf163Q5TEZ5 329 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 LYPD8Q6UX82 237 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 IL20RBQ6UXL0 311 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 SLC29A4Q7RTT9 530 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 R3HCC1LQ7Z5L2 792 aaKnown RBP13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 LRRC34Q8IZ02 419 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 TMEM156Q8N614 296 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 ARFGAP2Q8N6H7 521 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 ZNF441Q8N8Z8 693 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 NUBPLQ8TB37 319 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 ELP4Q96EB1 424 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 DPY30Q9C005 99 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 TRIM45Q9H8W5 580 aaPredicted RBP13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 KLHL1Q9NR64 748 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 LRFN1Q9P244 771 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 ERVK-11Q9UQG0 969 aa13.32□□□□□ -0.28
SUPT4H1-201ENST00000225504 C9JVG2 144 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 UPK1AO00322 258 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 PLOD2O00469 737 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 PLOD3O60568 738 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 PRAMEF2O60811 474 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 TGDSO95455 350 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 CASRP41180 1078 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 CYB561P49447 251 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 MANFP55145 182 aaKnown RBP13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 WNT3P56703 355 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 C21orf58P58505 322 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 C19orf57Q0VDD7 668 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 NNATQ16517 81 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 OR4F3Q6IEY1 312 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 MDGA2Q7Z553 956 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 CISD2Q8N5K1 135 aaKnown RBP13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 CEP70Q8NHQ1 597 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 ITPAQ9BY32 194 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 NXF5Q9H1B4 397 aaKnown RBP13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 EPN3Q9H201 632 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 ABI3Q9P2A4 366 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 NTNG1Q9Y2I2 539 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 PCDHGA10Q9Y5H3 936 aa13.31□□□□□ -0.28
SUPT4H1-201ENST00000225504 TRAV17A0A0B4J275 112 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 A0A1W2PRB8 838 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 TTLL8A6PVC2 850 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 SP1P08047 785 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 MDH1P40925 334 aaKnown RBP13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 SF3A3Q12874 501 aaKnown RBP eCLIP13.3□□□□□ -0.285e-6■■□□□ 14.3
SUPT4H1-201ENST00000225504 ZNF766Q5HY98 468 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 PRICKLE2Q7Z3G6 844 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 WDR53Q7Z5U6 358 aaPredicted RBP13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 PRR22Q8IZ63 422 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 ASB15Q8WXK1 588 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 DUSP26Q9BV47 211 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 ACSS1Q9NUB1 689 aaPredicted RBP13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 MAP10Q9P2G4 905 aa13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 C19orf53Q9UNZ5 99 aaPredicted RBP13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 HEMK1Q9Y5R4 338 aaPredicted RBP13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 NUP214P35658 2090 aaPredicted RBP13.3□□□□□ -0.28
SUPT4H1-201ENST00000225504 A0A087WV62 115 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 UBDO15205 165 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 C6orf47O95873 294 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 GPC1P35052 558 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 RPL3P39023 403 aaKnown RBP13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 DGKQP52824 942 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 GYS2P54840 703 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 CORO7P57737 925 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 INPP5JQ15735 1006 aaPredicted RBP13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 ZNF791Q3KP31 576 aaPredicted RBP13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 SPANXN4Q5MJ08 99 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 HLA-DQA1Q5Y7H0 255 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 DESI1Q6ICB0 168 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 CGB2Q6NT52 195 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 CAMKMTQ7Z624 323 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 CLECL1Q8IZS7 167 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 CYP4Z2PQ8N1L4 340 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 OR2L13Q8N349 312 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 TP53INP1Q96A56 240 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 SNRNP40Q96DI7 357 aaKnown RBP13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 ERP27Q96DN0 273 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 ZBED6CLQ96FA7 236 aaPredicted RBP13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 TAAR6Q96RI8 345 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 PRPF18Q99633 342 aaKnown RBP13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 TRIM4Q9C037 500 aa13.29□□□□□ -0.28
SUPT4H1-201ENST00000225504 CLMPQ9H6B4 373 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms