RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TMEM121BQ9BXQ6 578 aaPredicted RBP23.52■■□□□ 1.36
RUNDC3A-201ENST00000225441 SLC17A9Q9BYT1 436 aa23.52■■□□□ 1.36
RUNDC3A-201ENST00000225441 KLHL25Q9H0H3 589 aa23.52■■□□□ 1.36
RUNDC3A-201ENST00000225441 POLR2J3Q9H1A7 115 aaKnown RBP23.52■■□□□ 1.36
RUNDC3A-201ENST00000225441 IRGMA1A4Y4 181 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 ENTPD6O75354 484 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 PPP2R1BP30154 601 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 CCT3P49368 545 aaKnown RBP23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 ARFIP1P53367 373 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 MFSD4BQ5TF39 518 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 PGBD2Q6P3X8 592 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 TNFAIP8L2Q6P589 184 aaPredicted RBP23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 FAM26EQ8N5C1 309 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 SCAIQ8N9R8 606 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 OR9Q1Q8NGQ5 310 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 IL17FQ96PD4 163 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 F2RL3Q96RI0 385 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 SORBS1Q9BX66 1292 aaKnown RBP23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 BTBD1Q9H0C5 482 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 BCL2L10Q9HD36 194 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 MBNL1Q9NR56 388 aaKnown RBP23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 TAC3Q9UHF0 121 aa23.51■■□□□ 1.35
RUNDC3A-201ENST00000225441 NDUFS4O43181 175 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 OR10H3O60404 316 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 CLEC3AO75596 197 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 POU1F1P28069 291 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 ACSL1P33121 698 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 PPP2CBP62714 309 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 PPP2CAP67775 309 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 IRF4Q15306 451 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 SSX1Q16384 188 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 TMEM35AQ53FP2 167 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 PRAMEF8Q5VWM4 474 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 PRAMEF7Q5VXH5 474 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 ANKRD53Q8N9V6 530 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 TSTD1Q8NFU3 115 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 BBS10Q8TAM1 723 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 C1QTNF7Q9BXJ2 289 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 POLDIP3Q9BY77 421 aaKnown RBP23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 SEMA3GQ9NS98 782 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 NPAP1Q9NZP6 1156 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 RHCGQ9UBD6 479 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 SEC14L3Q9UDX4 400 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 MUTYHQ9UIF7 546 aa23.5■■□□□ 1.35
RUNDC3A-201ENST00000225441 PSMA1P25786 263 aaKnown RBP23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 TEAD1P28347 426 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 CYP4F2P78329 520 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 C1DQ13901 141 aaKnown RBP23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 SPHARQ15513 63 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 TMEM64Q6YI46 380 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 HEATR4Q86WZ0 1026 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 MMP21Q8N119 569 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 TBC1D19Q8N5T2 526 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 ASB12Q8WXK4 309 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 SLC30A2Q9BRI3 323 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 POLE4Q9NR33 117 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 ACSL5Q9ULC5 683 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 SLC9A8Q9Y2E8 581 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 TRPM6Q9BX84 2022 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 SNPHO15079 494 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 IGLV3-19P01714 112 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 MAT2AP31153 395 aaKnown RBP23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 MLLT11Q13015 90 aaPredicted RBP23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 SLC13A2Q13183 592 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 SEC23BQ15437 767 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 RPS26P11Q5JNZ5 115 aaPredicted RBP23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 TMEM31Q5JXX7 168 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 BHLHB9Q6PI77 547 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 AKAP14Q86UN6 197 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 NANOGP1Q8N7R0 232 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 SFXN5Q8TD22 340 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 CEP19Q96LK0 163 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 FAIM2Q9BWQ8 316 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 HHATLQ9HCP6 504 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 STUB1Q9UNE7 303 aa23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.49■■□□□ 1.35
RUNDC3A-201ENST00000225441 LRRC72A6NJI9 287 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 SLC28A2O43868 658 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 GPX5O75715 221 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 UGT2B17O75795 530 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 DLGAP3O95886 979 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 GSTM3P21266 225 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 GJD3Q8N144 294 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 LMNTD1Q8N9Z9 388 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 MOAP1Q96BY2 351 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 SLC35G5Q96KT7 338 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 WDFY2Q96P53 400 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 MENTQ9BUN1 341 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 MOV10Q9HCE1 1003 aaKnown RBP23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 SLC6A14Q9UN76 642 aa23.48■■□□□ 1.35
RUNDC3A-201ENST00000225441 SLC35F4A4IF30 521 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 STK25O00506 426 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 KMOO15229 486 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 ALOX12P18054 663 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 KHKP50053 298 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 CRISP3P54108 245 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 CDK3Q00526 305 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 SELENBP1Q13228 472 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 PRR23CQ6ZRP0 262 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 CLDN23Q96B33 292 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms