RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 TMED9Q9BVK6 235 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 POLDIP3Q9BY77 421 aaKnown RBP19.41■□□□□ 0.7
PMS1-222ENST00000639501 RNF32Q9H0A6 362 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 OR51B5Q9H339 312 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 MARCH5Q9NX47 278 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 GULP1Q9UBP9 304 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 OR2AG2A6NM03 316 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 FAAHO00519 579 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 SGTAO43765 313 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 FKTNO75072 461 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 TGFB1P01137 390 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 NR2F6P10588 404 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 RPL17P18621 184 aaKnown RBP19.41■□□□□ 0.7
PMS1-222ENST00000639501 GABRA5P31644 462 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 GINS1Q14691 196 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 SPDYE7PQ495Y7 208 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 C3orf38Q5JPI3 329 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 TJAP1Q5JTD0 557 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 PLEKHS1Q5SXH7 462 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 TMEM173Q86WV6 379 aaPredicted RBP19.41■□□□□ 0.7
PMS1-222ENST00000639501 RASGRP3Q8IV61 690 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 HS6ST3Q8IZP7 471 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 ZNF431Q8TF32 576 aaPredicted RBP19.41■□□□□ 0.7
PMS1-222ENST00000639501 C16orf78Q8WTQ4 265 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 RAB8BQ92930 207 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 UCN3Q969E3 161 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 AP2M1Q96CW1 435 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 CXorf40BQ96DE9 158 aa19.41■□□□□ 0.7
PMS1-222ENST00000639501 CKAP5Q14008 2032 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.4■□□□□ 0.7
PMS1-222ENST00000639501 IMPA1P29218 277 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 NNMTP40261 264 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 PIN1Q13526 163 aaPredicted RBP19.4■□□□□ 0.7
PMS1-222ENST00000639501 BRAT1Q6PJG6 821 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 CD200R1LQ6Q8B3 271 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 ZNF783Q6ZMS7 281 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 CREB3L1Q96BA8 519 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 TMEM19Q96HH6 336 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 C19orf43Q9BQ61 176 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 C17orf62Q9BQA9 187 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 FUZQ9BT04 418 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 SEMA3GQ9NS98 782 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 SLCO1C1Q9NYB5 712 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 CLEC4EQ9ULY5 219 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 POLHQ9Y253 713 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 GSTK1Q9Y2Q3 226 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 A0A1W2PRB8 838 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 PDPK1O15530 556 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 SOCS5O75159 536 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 FGF9P31371 208 aaPredicted RBP19.4■□□□□ 0.7
PMS1-222ENST00000639501 PREPP48147 710 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 CCNJQ5T5M9 372 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 TPRG1Q6ZUI0 275 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 ASB18Q6ZVZ8 466 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 NACC2Q96BF6 587 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 RNFT2Q96EX2 444 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 SORBS1Q9BX66 1292 aaKnown RBP19.4■□□□□ 0.7
PMS1-222ENST00000639501 KLF16Q9BXK1 252 aaPredicted RBP19.4■□□□□ 0.7
PMS1-222ENST00000639501 PLA2G12AQ9BZM1 189 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 B3GNT4Q9C0J1 378 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 FBXW2Q9UKT8 454 aa19.4■□□□□ 0.7
PMS1-222ENST00000639501 LAMA3Q16787 3333 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 C2orf92A0A1B0GVN3 265 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 LIMS3P0CW19 117 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 LIMS4P0CW20 117 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 MMP11P24347 488 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 CSTF1Q05048 431 aaKnown RBP19.39■□□□□ 0.69
PMS1-222ENST00000639501 TECPR1Q7Z6L1 1165 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 PLA2G15Q8NCC3 412 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 TBC1D17Q9HA65 648 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 NCKAP1Q9Y2A7 1128 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 NME6O75414 186 aaPredicted RBP19.39■□□□□ 0.69
PMS1-222ENST00000639501 SYPP08247 313 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 HK1P19367 917 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 ELK1P19419 428 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 SLC6A1P30531 599 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 DGKGP49619 791 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 MEF2AQ02078 507 aaPredicted RBP19.39■□□□□ 0.69
PMS1-222ENST00000639501 RIN1Q13671 783 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 FAM71E1Q6IPT2 247 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 METAP1DQ6UB28 335 aaPredicted RBP19.39■□□□□ 0.69
PMS1-222ENST00000639501 FAM92BQ6ZTR7 304 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 LHFPL3Q86UP9 236 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 LSRQ86X29 649 aaPredicted RBP19.39■□□□□ 0.69
PMS1-222ENST00000639501 MARCH9Q86YJ5 346 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 SLC30A8Q8IWU4 369 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 GHDCQ8N2G8 530 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 ARIH2OSQ8N7S6 290 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 PDXPQ96GD0 296 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 MSANTD3Q96H12 275 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 LYSMD1Q96S90 227 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 ZSCAN5AQ9BUG6 496 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 SLC6A16Q9GZN6 736 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 SPNS1Q9H2V7 528 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 PIGUQ9H490 435 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 UCKL1Q9NWZ5 548 aa19.39■□□□□ 0.69
PMS1-222ENST00000639501 TMEM129A0AVI4 362 aa19.38■□□□□ 0.69
PMS1-222ENST00000639501 TRIM77I1YAP6 450 aa19.38■□□□□ 0.69
PMS1-222ENST00000639501 HMGA1P17096 107 aaKnown RBP19.38■□□□□ 0.69
PMS1-222ENST00000639501 EFNB1P98172 346 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms