RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 FBXW2Q9UKT8 454 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 ENTPD4Q9Y227 616 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 MEMO1Q9Y316 297 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 TSC22D4Q9Y3Q8 395 aa7.26□□□□□ -1.25
PNKP-229ENST00000637897 GOLGA8QA0A0J9YX86 632 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 A0A1B0GTH9 108 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 ARHGAP10A1A4S6 786 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 GOLGA8OA6NCC3 632 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 PABPN1LA6NDY0 278 aaKnown RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 PRSS44E7EML9 344 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 GOLGA8NF8WBI6 632 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 H0YIV9 168 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 PSMD12O00232 456 aaPredicted RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 CDK2AP1O14519 115 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 PGRMC2O15173 223 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 GYG2O15488 501 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 PROM1O43490 865 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 PEX1O43933 1283 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 MGRN1O60291 552 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 ZFAND5O76080 213 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 GBAP04062 536 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 CHRNGP07510 517 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 KRT16P08779 473 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 CELA3AP09093 270 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 CT62P0C5K7 136 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 CCL3P10147 92 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 PCNAP12004 261 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 ENDOUP21128 410 aaKnown RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 PRDX6P30041 224 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 ADSLP30566 484 aaPredicted RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 ALDH18A1P54886 795 aaKnown RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 TAS2R50P59544 299 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 HERVK_113P63132 956 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 KCNJ2P63252 427 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 RNF4P78317 190 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 DUSP2Q05923 314 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 DUSP8Q13202 625 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 SLAMF1Q13291 335 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 GTF2H2Q13888 395 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 ZNF791Q3KP31 576 aaPredicted RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 KRTCAP3Q53RY4 240 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 FBXW10Q5XX13 1052 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 OR4C11Q6IEV9 310 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 GTF2H2CQ6P1K8 395 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 BNC2Q6ZN30 1099 aaPredicted RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 FRMD7Q6ZUT3 714 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 MAVSQ7Z434 540 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 ZNF808Q8N4W9 903 aaPredicted RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 TMEM178AQ8NBL3 297 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 SIMC1Q8NDZ2 872 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 SUN3Q8TAQ9 357 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 AGAP11Q8TF27 550 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 MARVELD3Q96A59 401 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 SENP5Q96HI0 755 aaPredicted RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 KCNC2Q96PR1 638 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 TBCDQ9BTW9 1192 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 CCDC28BQ9BUN5 200 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 ERVK-6Q9BXR3 956 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 TRIM8Q9BZR9 551 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 MMADHCQ9H3L0 296 aaPredicted RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 DDX31Q9H8H2 851 aaKnown RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 ZDHHC11Q9H8X9 412 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 TCF7L2Q9NQB0 619 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 FARSBQ9NSD9 589 aaKnown RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 TEX10Q9NXF1 929 aaPredicted RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 OPTCQ9UBM4 332 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 PCTPQ9UKL6 214 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 KLF2Q9Y5W3 355 aaPredicted RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 INTS1Q8N201 2190 aaKnown RBP7.25□□□□□ -1.25
PNKP-229ENST00000637897 SPG11Q96JI7 2443 aa7.25□□□□□ -1.25
PNKP-229ENST00000637897 KIAA1549Q9HCM3 1950 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 CCDC168Q8NDH2 2452 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 HCFC1P51610 2035 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 PHF3Q92576 2039 aaKnown RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 GLOD5A6NK44 160 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 C17orf105B2RV13 164 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 KDM4EB2RXH2 506 aaPredicted RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 PDE9AO76083 593 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 AIFM1O95831 613 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 ENO1P06733 434 aaKnown RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 RPS17P08708 135 aaKnown RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 RFPL3SP0C7P2 107 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 EPB42P16452 691 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 ZNF24P17028 368 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 TSPAN8P19075 237 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 NCF2P19878 526 aaPredicted RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 POU3F2P20265 443 aaPredicted RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 S1PR1P21453 382 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 HTR1EP28566 365 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 PIK3CBP42338 1070 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 STT3AP46977 705 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 SKP1P63208 163 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 TNFRSF17Q02223 184 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 FOLH1Q04609 750 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 TFF3Q07654 80 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 MGAT2Q10469 447 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 LAPTM5Q13571 262 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 DDX39BQ13838 428 aaKnown RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 SNCBQ16143 134 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 CPSF6Q16630 551 aaKnown RBP eCLIP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms