RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 GNA13Q14344 377 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 FAM98BQ52LJ0 330 aaKnown RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 CEACAM20Q6UY09 585 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 RBM44Q6ZP01 1051 aaKnown RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 LRRC74BQ6ZQY2 392 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 QSOX2Q6ZRP7 698 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 CCDC80Q76M96 950 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 SZRD1Q7Z422 152 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 PPP1R3BQ86XI6 285 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 RCBTB1Q8NDN9 531 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 SLCO4A1Q96BD0 722 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 ZNF578Q96N58 590 aaPredicted RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 ASPSCR1Q9BZE9 553 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 VCX3BQ9H321 246 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 YY1AP1Q9H869 796 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 MKKSQ9NPJ1 570 aaPredicted RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 P2RX2Q9UBL9 471 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 DHCR7Q9UBM7 475 aaKnown RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 NDOR1Q9UHB4 597 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 RIMS3Q9UJD0 308 aa14.39□□□□□ -0.11
CLN6-219ENST00000637329 TMEM184BQ9Y519 407 aaPredicted RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 COL27A1Q8IZC6 1860 aaPredicted RBP14.39□□□□□ -0.11
CLN6-219ENST00000637329 ANKRD11Q6UB99 2663 aaPredicted RBP14.38□□□□□ -0.11
CLN6-219ENST00000637329 FAM227AF5H4B4 570 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 TMX2-CTNND1H3BSU7 103 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 AGR2O95994 175 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 NUDT7P0C024 238 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 RAP2AP10114 183 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 KDELR2P33947 212 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 PDX1P52945 283 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 PCBP3P57721 371 aaKnown RBP14.38□□□□□ -0.11
CLN6-219ENST00000637329 CDK6Q00534 326 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 E2F1Q01094 437 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 SPEM2Q0P670 501 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 STX4Q12846 297 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 SLC13A2Q13183 592 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 LTB4RQ15722 352 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLN6-219ENST00000637329 TBCELQ5QJ74 424 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 FHL5Q5TD97 284 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 ARHGAP40Q5TG30 622 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 PRAMEF8Q5VWM4 474 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 PRAMEF7Q5VXH5 474 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 PACS2Q86VP3 889 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 HORMAD2Q8N7B1 307 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 NUP43Q8NFH3 380 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 TMEM121BQ9BXQ6 578 aaPredicted RBP14.38□□□□□ -0.11
CLN6-219ENST00000637329 RBCK1Q9BYM8 510 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 SLC7A5P2Q9GIP4 190 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 LANCL2Q9NS86 450 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 MAT2BQ9NZL9 334 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 AKAP7Q9P0M2 348 aaPredicted RBP14.38□□□□□ -0.11
CLN6-219ENST00000637329 C19orf53Q9UNZ5 99 aaPredicted RBP14.38□□□□□ -0.11
CLN6-219ENST00000637329 RP1P56715 2156 aa14.38□□□□□ -0.11
CLN6-219ENST00000637329 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 UPK1AO00322 258 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 HMGN4O00479 90 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 OR10H2O60403 315 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 COQ9O75208 318 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 RFPL3O75679 317 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 SCRG1O75711 98 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 BAG2O95816 211 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 ONECUT2O95948 504 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 SERPINA1P01009 418 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 IFNA14P01570 189 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 HMGN2P05204 90 aaKnown RBP14.37□□□□□ -0.11
CLN6-219ENST00000637329 ALAS2P22557 587 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 SOX11P35716 441 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 VHLP40337 213 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 STT3AP46977 705 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 PTDSS1P48651 473 aaKnown RBP14.37□□□□□ -0.11
CLN6-219ENST00000637329 SESN3P58005 492 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 CHRNB3Q05901 458 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 SYT16Q17RD7 645 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 PRICKLE4Q2TBC4 344 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 LRRC23Q53EV4 343 aaPredicted RBP14.37□□□□□ -0.11
CLN6-219ENST00000637329 REEP3Q6NUK4 255 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 MFSD12Q6NUT3 480 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 TNFAIP8L2Q6P589 184 aaPredicted RBP14.37□□□□□ -0.11
CLN6-219ENST00000637329 ZCCHC12Q6PEW1 402 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 EIF3MQ7L2H7 374 aaKnown RBP14.37□□□□□ -0.11
CLN6-219ENST00000637329 PATL1Q86TB9 770 aaKnown RBP14.37□□□□□ -0.11
CLN6-219ENST00000637329 OR4N5Q8IXE1 308 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 GALNT12Q8IXK2 581 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 VWA5B2Q8N398 1253 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 METTL27Q8N6F8 245 aaPredicted RBP14.37□□□□□ -0.11
CLN6-219ENST00000637329 BMPERQ8N8U9 685 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 OR7G2Q8NG99 324 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 NFKBIDQ8NI38 313 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 CTHRC1Q96CG8 243 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 GIMAP5Q96F15 307 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 DGAT2Q96PD7 388 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 ACTRT3Q9BYD9 372 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 TGIF2Q9GZN2 237 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 OR51I1Q9H343 314 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 SERHL2Q9H4I8 314 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 C14orf105Q9NVL8 296 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 ADPRHL2Q9NX46 363 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 TRPC4Q9UBN4 977 aa14.37□□□□□ -0.11
CLN6-219ENST00000637329 AURKCQ9UQB9 309 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms