RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 TBC1D20Q96BZ9 403 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 MTFMTQ96DP5 389 aaKnown RBP11.78□□□□□ -0.52
CTSD-208ENST00000636843 ASB9Q96DX5 294 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 LURAP1Q96LR2 239 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 FRMD6Q96NE9 622 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 ZNF570Q96NI8 536 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 HOPXQ9BPY8 73 aaPredicted RBP11.78□□□□□ -0.52
CTSD-208ENST00000636843 TMEM79Q9BSE2 394 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 NTMT1Q9BV86 223 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 CDCP1Q9H5V8 836 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 CLK4Q9HAZ1 481 aaKnown RBP11.78□□□□□ -0.52
CTSD-208ENST00000636843 GID8Q9NWU2 228 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 ANKRD10Q9NXR5 420 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 ADA2Q9NZK5 511 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 ZIM2Q9NZV7 527 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 LRFN1Q9P244 771 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 TRPS1Q9UHF7 1281 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 NPIPA1Q9UND3 350 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 MEMO1Q9Y316 297 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 SCN3AQ9NY46 2000 aa11.78□□□□□ -0.52
CTSD-208ENST00000636843 TRBC2A0A5B9 178 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 ZNF860A6NHJ4 632 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 NR5A2O00482 541 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 ANGPT2O15123 496 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 NDUFS4O43181 175 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 CHST10O43529 356 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 OR1F1O43749 312 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 MAN1A2O60476 641 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 STK16O75716 305 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 NEURL1O76050 574 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 CLDN14O95500 239 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 RPSAP08865 295 aaKnown RBP11.77□□□□□ -0.52
CTSD-208ENST00000636843 EPB42P16452 691 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 ALOX12P18054 663 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 GGT5P36269 586 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 HNMTP50135 292 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 AP1S2P56377 157 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 MEF2AQ02078 507 aaPredicted RBP11.77□□□□□ -0.52
CTSD-208ENST00000636843 C18orf21Q32NC0 220 aaPredicted RBP11.77□□□□□ -0.52
CTSD-208ENST00000636843 SPATS1Q496A3 300 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 BLOC1S3Q6QNY0 202 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 GHDCQ8N2G8 530 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 ZNF740Q8NDX6 193 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 OR5T3Q8NGG3 340 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 OR56A3Q8NH54 315 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 PYDC1Q8WXC3 89 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 ATL1Q8WXF7 558 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 RBCK1Q9BYM8 510 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 TRIM8Q9BZR9 551 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 ARL15Q9NXU5 204 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 TMEM181Q9P2C4 612 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 GIMAP2Q9UG22 337 aa11.77□□□□□ -0.52
CTSD-208ENST00000636843 FBN2P35556 2912 aa11.77□□□□□ -0.53
CTSD-208ENST00000636843 SLC28A1O00337 649 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 ACOT8O14734 319 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 ABOP16442 354 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 SSTR2P30874 369 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 ST13P50502 369 aaKnown RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 EMX2Q04743 252 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 MAD2L1Q13257 205 aaPredicted RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 TRIM25Q14258 630 aaKnown RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 MAPKAPK3Q16644 382 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 DEFB134Q4QY38 66 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 C6orf136Q5SQH8 315 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 FAM219BQ5XKK7 198 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 QSOX2Q6ZRP7 698 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 Q6ZSR9 355 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 ABHD13Q7L211 337 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 LRRC70Q7Z2Q7 622 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 EID3Q8N140 333 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 OR2T11Q8NH01 316 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 NT5CQ8TCD5 201 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 FBXL8Q96CD0 374 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 PPP3R2Q96LZ3 170 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 CDK15Q96Q40 435 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 ZNF184Q99676 751 aaPredicted RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 TSPAN10Q9H1Z9 355 aaPredicted RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 TRIM45Q9H8W5 580 aaPredicted RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 C6orf203Q9P0P8 240 aaPredicted RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 NCOA6Q14686 2063 aaPredicted RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 A0A1W2PP18 115 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 URADA6NGE7 173 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 CASQ2O14958 399 aaPredicted RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 RGS14O43566 566 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 NME2P1O60361 137 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 PRMT3O60678 531 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 SLC25A12O75746 678 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 SLC22A3O75751 556 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 STAMBPO95630 424 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 SERPIND1P05546 499 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 PCSK2P16519 638 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 NME2P22392 152 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 AHRP35869 848 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 CYB561P49447 251 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 DIO3P55073 304 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 MLF1P58340 268 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 RCAN2Q14206 197 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 ZNF295-AS1Q8N0V1 137 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 FNDC5Q8NAU1 212 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms