RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 KRT4P19013 534 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 CNR1P21554 472 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 KIR3DL1P43629 444 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 VSNL1P62760 191 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 ACSM2AQ08AH3 577 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 ZNF791Q3KP31 576 aaPredicted RBP16.95■□□□□ 0.3
CLN6-214ENST00000636314 SPIN4Q56A73 249 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 CFAP157Q5JU67 520 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 HLA-DQA1Q5Y7H0 255 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 ACSM2BQ68CK6 577 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 SLC22A16Q86VW1 577 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 CHERPQ8IWX8 916 aaKnown RBP16.95■□□□□ 0.3
CLN6-214ENST00000636314 DND1Q8IYX4 353 aaKnown RBP16.95■□□□□ 0.3
CLN6-214ENST00000636314 C4orf33Q8N1A6 199 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 FAM13CQ8NE31 585 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 TM4SF18Q96CE8 201 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 RYDENQ9NUL5 291 aaKnown RBP16.95■□□□□ 0.3
CLN6-214ENST00000636314 MID2Q9UJV3 735 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 PSME2Q9UL46 239 aa16.95■□□□□ 0.3
CLN6-214ENST00000636314 A0A1B0GTH9 108 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 GNG14A0A1W2PPG7 69 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 H3BQF6 201 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 CRCPO75575 148 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 CSNK2A2P19784 350 aaPredicted RBP16.94■□□□□ 0.3
CLN6-214ENST00000636314 CAPN3P20807 821 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 SERPINB3P29508 390 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 PTGS2P35354 604 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 FEN1P39748 380 aaKnown RBP16.94■□□□□ 0.3
CLN6-214ENST00000636314 DNASE1L1P49184 302 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 NAGLUP54802 743 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 PPIAP62937 165 aaKnown RBP16.94■□□□□ 0.3
CLN6-214ENST00000636314 HMGCS1Q01581 520 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 FUT7Q11130 342 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 LYPD8Q6UX82 237 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 RGS9BPQ6ZS82 235 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 FRMD7Q6ZUT3 714 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 FGD2Q7Z6J4 655 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 TAGAPQ8N103 731 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 EID3Q8N140 333 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 VWA5B2Q8N398 1253 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 OR52N2Q8NGI0 321 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 BRINP2Q9C0B6 783 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 IQCGQ9H095 443 aaKnown RBP16.94■□□□□ 0.3
CLN6-214ENST00000636314 OR10A5Q9H207 317 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 CES1P1Q9UKY3 287 aa16.94■□□□□ 0.3
CLN6-214ENST00000636314 TLDC2A0PJX2 215 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 UBFD1O14562 309 aaKnown RBP16.93■□□□□ 0.3
CLN6-214ENST00000636314 ATP1B1P05026 303 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 TPOP07202 933 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 IL3P08700 152 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 FBXO45P0C2W1 286 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 CPA3P15088 417 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 TIA1P31483 386 aaKnown RBP eCLIP16.93■□□□□ 0.31e-5■■■□□ 19.1
CLN6-214ENST00000636314 NR0B1P51843 470 aaKnown RBP16.93■□□□□ 0.3
CLN6-214ENST00000636314 DNAJB13P59910 316 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 TLE4Q04727 773 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 IMPG1Q17R60 797 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 SLC22A10Q63ZE4 541 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 ARHGAP11AQ6P4F7 1023 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 PAOXQ6QHF9 649 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 SCIMPQ6UWF3 145 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 CD163Q86VB7 1156 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 RIBC1Q8N443 379 aaPredicted RBP16.93■□□□□ 0.3
CLN6-214ENST00000636314 FAM109AQ8N4B1 249 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 ZNF441Q8N8Z8 693 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 OR7G1Q8NGA0 311 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 OR2W6PQ8NHA6 318 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 PAQR8Q8TEZ7 354 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 C14orf79Q96F83 325 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 APIPQ96GX9 242 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 DEFB127Q9H1M4 99 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 C12orf65Q9H3J6 166 aaKnown RBP16.93■□□□□ 0.3
CLN6-214ENST00000636314 IL1RL2Q9HB29 575 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 PFDN4Q9NQP4 134 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 UTS2RQ9UKP6 389 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 ZNF780BQ9Y6R6 833 aa16.93■□□□□ 0.3
CLN6-214ENST00000636314 EXPH5Q8NEV8 1989 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 PDE9AO76083 593 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 GLSO94925 669 aaPredicted RBP16.92■□□□□ 0.3
CLN6-214ENST00000636314 NUDT17P0C025 328 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 PIGAP37287 484 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 TMED10P49755 219 aaKnown RBP16.92■□□□□ 0.3
CLN6-214ENST00000636314 FOXA1P55317 472 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 NRG3P56975 720 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 KCNJ2P63252 427 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 RAE1P78406 368 aaKnown RBP16.92■□□□□ 0.3
CLN6-214ENST00000636314 SLC18A2Q05940 514 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 BTKQ06187 659 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 IFFO1Q0D2I5 559 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 TESK1Q15569 626 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 PRICKLE4Q2TBC4 344 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 SPDYAQ5MJ70 313 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 PRAMEF20Q5VT98 475 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 LIPMQ5VYY2 423 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 DOLPP1Q86YN1 238 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 LRRC25Q8N386 305 aaPredicted RBP16.92■□□□□ 0.3
CLN6-214ENST00000636314 FBXW8Q8N3Y1 598 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 ZNF615Q8N8J6 731 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 OR10G3Q8NGC4 313 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 FAM57AQ8TBR7 257 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms