RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SELENOMQ8WWX9 145 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 SYAP1Q96A49 352 aaPredicted RBP4.06□□□□□ -1.76
CPNE3-213ENST00000622183 ANKRD27Q96NW4 1050 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 CPXM1Q96SM3 734 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 MCRIP2Q9BUT9 160 aaKnown RBP4.06□□□□□ -1.76
CPNE3-213ENST00000622183 STRADBQ9C0K7 418 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 MDFICQ9P1T7 246 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 ATXN10Q9UBB4 475 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 BLOC1S6Q9UL45 172 aa4.06□□□□□ -1.76
CPNE3-213ENST00000622183 A0A0A6YYD4 124 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 NTN3O00634 580 aaPredicted RBP4.05□□□□□ -1.76
CPNE3-213ENST00000622183 PDXKO00764 312 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 SOCS3O14543 225 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 CHADO15335 359 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 CFLARO15519 480 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 TOM1L1O75674 476 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 RRASP10301 218 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 FOSL2P15408 326 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 PTPN6P29350 595 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 TRIM23P36406 574 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 SGSHP51688 502 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 HSF2Q03933 536 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 EMC2Q15006 297 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 UNC50Q53HI1 259 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 TCHHL1Q5QJ38 904 aaPredicted RBP4.05□□□□□ -1.76
CPNE3-213ENST00000622183 ZNF613Q6PF04 617 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 AFTPHQ6ULP2 937 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 NUFIP2Q7Z417 695 aaKnown RBP4.05□□□□□ -1.76
CPNE3-213ENST00000622183 FAM131BQ86XD5 332 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 MISPQ8IVT2 679 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 Q8NBF4 154 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 OR1B1Q8NGR6 318 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 WDR36Q8NI36 951 aaKnown RBP4.05□□□□□ -1.76
CPNE3-213ENST00000622183 SSC4DQ8WTU2 575 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 SYT11Q9BT88 431 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 FICDQ9BVA6 458 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 NT5DC2Q9H857 520 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 COQ10BQ9H8M1 238 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 VAT1LQ9HCJ6 419 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 YAE1D1Q9NRH1 226 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 SLC35D1Q9NTN3 355 aa4.05□□□□□ -1.76
CPNE3-213ENST00000622183 EIF3KQ9UBQ5 218 aaKnown RBP4.05□□□□□ -1.76
CPNE3-213ENST00000622183 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.05□□□□□ -1.76
CPNE3-213ENST00000622183 IGLV4-3A0A075B6K6 122 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 TRGV8A0A0C4DH27 118 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 ANKRD30BLA7E2S9 258 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 RNF212BA8MTL3 300 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 LANCL1O43813 399 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 VPS26AO75436 327 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 KRT6BP04259 564 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 GSTA1P08263 222 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 CCDC159P0C7I6 412 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 MT3P25713 68 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 KRT6CP48668 564 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 IRX1P78414 480 aaPredicted RBP4.04□□□□□ -1.76
CPNE3-213ENST00000622183 KLHL30Q0D2K2 578 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 TAF7Q15545 349 aaPredicted RBP4.04□□□□□ -1.76
CPNE3-213ENST00000622183 ZKSCAN8Q15776 578 aaPredicted RBP4.04□□□□□ -1.76
CPNE3-213ENST00000622183 PARP6Q2NL67 630 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 ADPRMQ3LIE5 342 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 POM121L1PQ3SYA9 428 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 RIPPLY2Q5TAB7 128 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 WDR25Q64LD2 544 aaPredicted RBP4.04□□□□□ -1.76
CPNE3-213ENST00000622183 RNF130Q86XS8 419 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 PYROXD2Q8N2H3 581 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 ZNRF1Q8ND25 227 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 LRRC15Q8TF66 581 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 SLC25A36Q96CQ1 311 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 MOCOSQ96EN8 888 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 SLC45A3Q96JT2 553 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 LINC00479Q96M42 142 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 C19orf43Q9BQ61 176 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 LIME1Q9H400 295 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 NRN1Q9NPD7 142 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 NUDT4Q9NZJ9 180 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 P2RX2Q9UBL9 471 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 RARRES3Q9UL19 164 aa4.04□□□□□ -1.76
CPNE3-213ENST00000622183 A0A0U1RQV5 110 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 RNF222A6NCQ9 220 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 ASB14A6NK59 587 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 EPM2AB3EWF7 344 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 PDHXO00330 501 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 CYB561D2O14569 222 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 PEX11AO75192 247 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 OR9G9P0C7N8 305 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 RNF224P0DH78 156 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 TRPC1P48995 793 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 NDUFV3P56181 108 aaKnown RBP4.03□□□□□ -1.76
CPNE3-213ENST00000622183 HSD17B7P56937 341 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 HERVK_113P63132 956 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 ERVK-8P63133 956 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 C2CD6Q53TS8 623 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 AGAP7PQ5VUJ5 663 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 FAAP20Q6NZ36 180 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 Q6ZTC4 211 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 CCDC71Q8IV32 467 aaPredicted RBP4.03□□□□□ -1.76
CPNE3-213ENST00000622183 ARFGAP2Q8N6H7 521 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 NPRL2Q8WTW4 380 aa4.03□□□□□ -1.76
CPNE3-213ENST00000622183 MCHR2Q969V1 340 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms