RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.36□□□□□ -0.43
SKP2-209ENST00000620197 TMEM25Q86YD3 366 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 IQCF1Q8N6M8 205 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 ANKRD53Q8N9V6 530 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 OR52P1PQ8NH57 321 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 UBL7Q96S82 380 aaPredicted RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 SLC46A2Q9BY10 475 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 NLNQ9BYT8 704 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 PLA2G12AQ9BZM1 189 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 ZDHHC5Q9C0B5 715 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 POLMQ9NP87 494 aaPredicted RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 WASH6PQ9NQA3 447 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 RBFOX1Q9NWB1 397 aaKnown RBP12.36□□□□□ -0.43
SKP2-209ENST00000620197 NINQ8N4C6 2090 aa12.36□□□□□ -0.43
SKP2-209ENST00000620197 FABP12A6NFH5 140 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 RGS5O15539 181 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 GABRR2P28476 465 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 ATN1P54259 1190 aaPredicted RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 SMIM11AP58511 58 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 PPP3R1P63098 170 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.43
SKP2-209ENST00000620197 TAF12Q16514 161 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 MINDY4Q4G0A6 757 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 CASP12Q6UXS9 341 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 C11orf96Q7Z7L8 435 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 PDZD3Q86UT5 571 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 CADM2Q8N3J6 435 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 UPRTQ96BW1 309 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 MED30Q96HR3 178 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 KCTD7Q96MP8 289 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 TMEM43Q9BTV4 400 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 MS4A8Q9BY19 250 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 CCL26Q9Y258 94 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 TMA7Q9Y2S6 64 aaKnown RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 AUP1Q9Y679 476 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 C17orf113A0A1B0GUU1 675 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 ANHXE9PGG2 379 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 LRRTM2O43300 516 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 POU1F1P28069 291 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 ERP29P30040 261 aaKnown RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 EVX1P49640 407 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 MEF2AQ02078 507 aaPredicted RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 C1DQ13901 141 aaKnown RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 KIAA1841Q6NSI8 718 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 TMEM220Q6QAJ8 160 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 USP30Q70CQ3 517 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 C6orf120Q7Z4R8 191 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 SYT14Q8NB59 555 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 TP53I13Q8NBR0 393 aaPredicted RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 ACSS1Q9NUB1 689 aaPredicted RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 DYRK1BQ9Y463 629 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 FAM25AB3EWG3 89 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 FAM25CB3EWG5 89 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 FAM25GB3EWG6 89 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 TFECO14948 347 aaPredicted RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 PRODHO43272 600 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 KLF4O43474 513 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 IGHA1P01876 353 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 CD79BP40259 229 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 RUNX1T1Q06455 604 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 TAB1Q15750 504 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 UBE3DQ7Z6J8 389 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 PLCZ1Q86YW0 608 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 TAGAPQ8N103 731 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 LMNTD1Q8N9Z9 388 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 CLIP3Q96DZ5 547 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 LRR1Q96L50 414 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 DPEP2Q9H4A9 486 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 RRAGCQ9HB90 399 aa12.35□□□□□ -0.43
SKP2-209ENST00000620197 EXOSC4Q9NPD3 245 aaKnown RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 EXOGQ9Y2C4 368 aaKnown RBP12.35□□□□□ -0.43
SKP2-209ENST00000620197 MYL12BO14950 172 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 TLX2O43763 284 aaPredicted RBP12.34□□□□□ -0.43
SKP2-209ENST00000620197 OR10H3O60404 316 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 LALBAP00709 142 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 FHP07954 510 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 ABATP80404 500 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 TARDBPQ13148 414 aaKnown RBP eCLIP12.34□□□□□ -0.43
SKP2-209ENST00000620197 KLHL22Q53GT1 634 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 ZNF805Q5CZA5 627 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 EOGTQ5NDL2 527 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 KHDRBS2Q5VWX1 349 aaKnown RBP12.34□□□□□ -0.43
SKP2-209ENST00000620197 ATP6V1C2Q8NEY4 427 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 OR8D4Q8NGM9 314 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 UBE2E3Q969T4 207 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 DTD2Q96FN9 168 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 FOPNLQ96NB1 174 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 TIMP4Q99727 224 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 COQ7Q99807 217 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 GTPBP2Q9BX10 602 aaKnown RBP12.34□□□□□ -0.43
SKP2-209ENST00000620197 OR52A5Q9H2C5 316 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 GIMAP4Q9NUV9 329 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 TRAV19A0A0A6YYK7 116 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 IRGMA1A4Y4 181 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 ZNF197O14709 1029 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 TEX28O15482 410 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 ARFIP1P53367 373 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 TATDN3Q17R31 274 aa12.34□□□□□ -0.43
SKP2-209ENST00000620197 LILRA6Q6PI73 481 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms