RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 PFN3P60673 137 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 SNRPD1P62314 119 aaKnown RBP12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 GPR68Q15743 365 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 SPIN4Q56A73 249 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 CDC73Q6P1J9 531 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 ZNF613Q6PF04 617 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 Q6ZVU0 165 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 TSEN54Q7Z6J9 526 aaKnown RBP12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 COL26A1Q96A83 441 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 RIOK2Q9BVS4 552 aaKnown RBP12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 SLC6A16Q9GZN6 736 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 TTYH1Q9H313 450 aaPredicted RBP12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 MVB12BQ9H7P6 319 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 CACYBPQ9HB71 228 aaKnown RBP12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 ZCCHC3Q9NUD5 404 aaKnown RBP12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 LSM7Q9UK45 103 aaKnown RBP12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 A0A0A6YYJ9 748 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 H7C0S8 307 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 PEPDP12955 493 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 VIPR1P32241 457 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 ACVR1BP36896 505 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 MTAPQ13126 283 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 MEDAGQ5VYS4 303 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 PODNL1Q6PEZ8 512 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 TMEM220Q6QAJ8 160 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 KIF18BQ86Y91 864 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 HORMAD2Q8N7B1 307 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 LSMEM1Q8N8F7 131 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 TRPV1Q8NER1 839 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 AP2M1Q96CW1 435 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 SAMD11Q96NU1 681 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 BBS4Q96RK4 519 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 RDH14Q9HBH5 336 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 OR6C2Q9NZP2 312 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 LCTP09848 1927 aa12.57□□□□□ -0.4
CYFIP1-211ENST00000619348 OR6C75A6NL08 312 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SMAD9O15198 467 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ZNF623O75123 536 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ALPPP05187 535 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ATF6P18850 670 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 WDR5P61964 334 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 GPR176Q14439 515 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 FAM110CQ1W6H9 321 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SYT14P1Q58G82 188 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 FAM27D1Q5T7N8 215 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 LIPJQ5W064 366 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ZNF433Q8N7K0 673 aaPredicted RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ZNF614Q8N883 585 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 LSM14AQ8ND56 463 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 OR4M1Q8NGD0 313 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SLC38A5Q8WUX1 472 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 DCLRE1CQ96SD1 692 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 TRMT61BQ9BVS5 477 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 GTPBP2Q9BX10 602 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 DPAGT1Q9H3H5 408 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 UBQLN2Q9UHD9 624 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 EXO1Q9UQ84 846 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ZNF840PA6NDX5 716 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 FAM170BA6NMN3 283 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 H3BSH0 61 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 MSL3P1P0C860 447 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 HLA-DMAP28067 261 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 PDHA2P29803 388 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ETV3P41162 512 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 CTSOP43234 321 aaPredicted RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SF3A2Q15428 464 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SYPL1Q16563 259 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 RAET1GQ6H3X3 334 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 C11orf88Q6PI97 169 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 CFAP77Q6ZQR2 320 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 IDO2Q6ZQW0 420 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SLC24A5Q71RS6 500 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 CMTM8Q8IZV2 173 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 L3MBTL4Q8NA19 623 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ANGPTL6Q8NI99 470 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SLC16A10Q8TF71 515 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 FATE1Q969F0 183 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 COQ10AQ96MF6 247 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SCN4AP35499 1836 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 DOCK3Q8IZD9 2030 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 HEPACAM2A8MVW5 462 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 AKAP8O43823 692 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 OR5F1O95221 314 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SRPRAP08240 638 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 POLR2CP19387 275 aaPredicted RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ACSL1P33121 698 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 MAZP56270 477 aaKnown RBP12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 CLLU1OSQ5K130 101 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 ZBTB37Q5TC79 503 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 WASH2PQ6VEQ5 465 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 MSANTD1Q6ZTZ1 278 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 CLDN22Q8N7P3 220 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 C16orf78Q8WTQ4 265 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 OR51J1Q9H342 316 aa12.56□□□□□ -0.4
CYFIP1-211ENST00000619348 STOX2Q9P2F5 926 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms