RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 ECHDC3Q96DC8 303 aa16.9■□□□□ 0.3
ATXN2-227ENST00000616825 TMEM19Q96HH6 336 aa16.9■□□□□ 0.3
ATXN2-227ENST00000616825 PGAM5Q96HS1 289 aa16.9■□□□□ 0.3
ATXN2-227ENST00000616825 ZNF471Q9BX82 626 aaPredicted RBP16.9■□□□□ 0.3
ATXN2-227ENST00000616825 TRBV2A0A0J9YWF9 115 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 SLC19A2O60779 497 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 HNRNPA2B1P22626 353 aaKnown RBP16.89■□□□□ 0.3
ATXN2-227ENST00000616825 FAM76BQ5HYJ3 339 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 TMPRSS12Q86WS5 348 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 ZNF584Q8IVC4 421 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 MS4A15Q8N5U1 240 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 OR2T4Q8NH00 348 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 DOK4Q8TEW6 326 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 ZNF431Q8TF32 576 aaPredicted RBP16.89■□□□□ 0.3
ATXN2-227ENST00000616825 RFT1Q96AA3 541 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 LGALS12Q96DT0 336 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 PEX11GQ96HA9 241 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 NAA11Q9BSU3 229 aaPredicted RBP16.89■□□□□ 0.3
ATXN2-227ENST00000616825 LINC00597Q9H2U6 94 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 MTHFD2LQ9H903 347 aaPredicted RBP16.89■□□□□ 0.3
ATXN2-227ENST00000616825 DHDHQ9UQ10 334 aa16.89■□□□□ 0.3
ATXN2-227ENST00000616825 SCAMP2O15127 329 aaKnown RBP16.89■□□□□ 0.29
ATXN2-227ENST00000616825 ZNF35P13682 527 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 HSD17B1P14061 328 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 MAN2A2P49641 1150 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 IST1P53990 364 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 ERVPABLB-1P60509 514 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 SHC2P98077 582 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 DSC1Q08554 894 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 ATXN7L3Q14CW9 347 aaPredicted RBP16.89■□□□□ 0.29
ATXN2-227ENST00000616825 SCD5Q86SK9 330 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 DENND6BQ8NEG7 585 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 AKAP1Q92667 903 aaKnown RBP eCLIP16.89■□□□□ 0.29
ATXN2-227ENST00000616825 LRRC46Q96FV0 321 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 TMEM165Q9HC07 324 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 F5P12259 2224 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 A0A0G2JPF8 293 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 A6NLC8 198 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 HNRNPCL3B7ZW38 293 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 HNRNPCL4P0DMR1 293 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 POU4F2Q12837 409 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 NKAPLQ5M9Q1 402 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 LARP4Q71RC2 724 aaKnown RBP eCLIP16.89■□□□□ 0.29
ATXN2-227ENST00000616825 UBQLNLQ8IYU4 475 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 CLECL1Q8IZS7 167 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 ZNF611Q8N823 705 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 TMIEQ8NEW7 156 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 TOR1AIP2Q8NFQ8 470 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 DIO2Q92813 273 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 ZDHHC7Q9NXF8 308 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 MYH11P35749 1972 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 MYH10P35580 1976 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 AFDNP55196 1824 aaKnown RBP16.89■□□□□ 0.29
ATXN2-227ENST00000616825 A6NCN8 305 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 PROS1P07225 676 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 RABIFP47224 123 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 CDKL4Q5MAI5 379 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 OR7G3Q8NG95 312 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 OR5J2Q8NH18 312 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 ZFYVE21Q9BQ24 234 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 MYNNQ9NPC7 610 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 FTSJ1Q9UET6 329 aa16.89■□□□□ 0.29
ATXN2-227ENST00000616825 FMO6PO60774 539 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 ADAP00813 363 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 STSP08842 583 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 CD3GP09693 182 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 ADH7P40394 386 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 GBX1Q14549 363 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 CTC1Q2NKJ3 1217 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 NDUFAF5Q5TEU4 345 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 GTF2IRD2BQ6EKJ0 949 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 BEND4Q6ZU67 534 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 SSX6Q7RTT6 188 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 GTF2IRD2Q86UP8 949 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 KDM1BQ8NB78 822 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 OR8S1Q8NH09 359 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 SNIP1Q8TAD8 396 aaKnown RBP16.88■□□□□ 0.29
ATXN2-227ENST00000616825 L3HYPDHQ96EM0 354 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 DNAJA3Q96EY1 480 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 MAGIXQ9H6Y5 334 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 SPO11Q9Y5K1 396 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 ENPP4Q9Y6X5 453 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 DNAJC25-GNG10A0A024R161 153 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 SMAD9O15198 467 aaKnown RBP16.88■□□□□ 0.29
ATXN2-227ENST00000616825 GPR37L1O60883 481 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 CA3P07451 260 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 GSTM2P28161 218 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 GMPRP36959 345 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 WNT7BP56706 349 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 ZNF252P-AS1Q0IIN9 211 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 LRRN1Q6UXK5 716 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 ZNF100Q8IYN0 542 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 HAPLN2Q9GZV7 340 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 PARPBPQ9NWS1 579 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 ERVK-18Q9QC07 812 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 TRAV6A0A075B6T7 132 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 HRGP04196 525 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 GTF2F2P13984 249 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 GALK2Q01415 458 aa16.88■□□□□ 0.29
ATXN2-227ENST00000616825 TMEM69Q5SWH9 247 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms