RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 NKX6-1P78426 367 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SIGLEC14Q08ET2 396 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SCAPQ12770 1279 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 PDIA2Q13087 525 aaKnown RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SPP2Q13103 211 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ENPP2Q13822 863 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ATP6AP1Q15904 470 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF181Q2M3W8 571 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 UGT3A2Q3SY77 523 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 NRN1LQ496H8 165 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CDNFQ49AH0 187 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 RABGAP1LQ5R372 815 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SPOUT1Q5T280 376 aaKnown RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 PEAR1Q5VY43 1037 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 PLCXD3Q63HM9 321 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 WBP2NLQ6ICG8 309 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 MED27Q6P2C8 311 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 TMEM108Q6UXF1 575 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 RSPO2Q6UXX9 243 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 RBMS3Q6XE24 437 aaKnown RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SLC46A3Q7Z3Q1 461 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 LUZP2Q86TE4 346 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 KCNMB4Q86W47 210 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CLEC10AQ8IUN9 316 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CCDC71Q8IV32 467 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CDYL2Q8N8U2 506 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CCNYQ8ND76 341 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 FAM83FQ8NEG4 500 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SCAMP5Q8TAC9 235 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 PHOSPHO1Q8TCT1 267 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 BPIFB1Q8TDL5 484 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CSGALNACT1Q8TDX6 532 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 DEDD2Q8WXF8 326 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 C3orf49Q96BT1 292 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CMTM5Q96DZ9 223 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 RAX2Q96IS3 184 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 FAM84AQ96KN4 292 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 LINC00052Q96N35 136 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 COL21A1Q96P44 957 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 MCCC1Q96RQ3 725 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 POP1Q99575 1024 aaKnown RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 IL12RB2Q99665 862 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 MYOCQ99972 504 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 IFT27Q9BW83 186 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ROGDIQ9GZN7 287 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 HAPLN2Q9GZV7 340 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SLC25A18Q9H1K4 315 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 EPHX3Q9H6B9 360 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CHODLQ9H9P2 273 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ERVK13-1Q9NX77 482 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SPG21Q9NZD8 308 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF224Q9NZL3 707 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 DHCR7Q9UBM7 475 aaKnown RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 OR12D3Q9UGF7 316 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 MLXQ9UH92 298 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF639Q9UID6 485 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SNX12Q9UMY4 172 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 POLR3HQ9Y535 204 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 LIPGQ9Y5X9 500 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 NOS1P29475 1434 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 DCCP43146 1447 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 NCANO14594 1321 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ADGRA3Q8IWK6 1321 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ADGRA2Q96PE1 1338 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ADCY10Q96PN6 1610 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 IQGAP1P46940 1657 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ATP7AQ04656 1500 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CNTNAP1P78357 1384 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CDK5RAP2Q96SN8 1893 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 TANC1Q9C0D5 1861 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ARHGEF28Q8N1W1 1705 aaKnown RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ARHGEF5Q12774 1597 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CDC42BPGQ6DT37 1551 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ASXL2Q76L83 1435 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 LNP1A1A4G5 178 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 MCIDASD6RGH6 385 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 C1QTNF3-AMACRE9PGA6 284 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 H7C2Y5 167 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 HS3ST1O14792 307 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF264O43296 627 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 TLX3O43711 291 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 OR10H3O60404 316 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 PRAMEF2O60811 474 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 LYPLA1O75608 230 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 LRIG2O94898 1065 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 OR2C1O95371 312 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 KLKB1P03952 638 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 RLN2P04090 185 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 NPSP0C0P6 89 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF806P0C7X5 589 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 HAPLN1P10915 354 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SPNP16150 400 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 TNFRSF1AP19438 455 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 AGAP20933 346 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 EDNRBP24530 442 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 EEF1B2P24534 225 aaKnown RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 IL12AP29459 219 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 OTX1P32242 354 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 MAS1LP35410 378 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 GDNFP39905 211 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms