RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 IQCHQ86VS3 1027 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 LIX1LQ8IVB5 337 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 CPXM2Q8N436 756 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 OR4K5Q8NGD3 323 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 SLC5A11Q8WWX8 675 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 GLYATL1Q969I3 302 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 MTERF3Q96E29 417 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 WDR34Q96EX3 536 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 SENP5Q96HI0 755 aaPredicted RBP14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 TEFMQ96QE5 360 aaKnown RBP14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 FAM83CQ9BQN1 747 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 EGLN3Q9H6Z9 239 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 MAN2C1Q9NTJ4 1040 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 ICKQ9UPZ9 632 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 C12orf71A8MTZ7 269 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 CASKO14936 926 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 LEFTY1O75610 366 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 HLA-DQB1P01920 261 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 C1QBP02746 253 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 NR2F6P10588 404 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 ZNF30P17039 623 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 POLR2LP62875 67 aaKnown RBP14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 TNK1Q13470 666 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 IL18Q14116 193 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 SNAPC1Q16533 368 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 C3orf38Q5JPI3 329 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 HIST2H2AA3Q6FI13 130 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 NXPE4Q6UWF7 544 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 C6orf120Q7Z4R8 191 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 CFAP206Q8IYR0 622 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 RNFT2Q96EX2 444 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 IL17FQ96PD4 163 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 SOSTQ9BQB4 213 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 ACAT2Q9BWD1 397 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 SGPP1Q9BX95 441 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 GALNT9Q9HCQ5 603 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 STARD7Q9NQZ5 370 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 MRPL17Q9NRX2 175 aaKnown RBP14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 SLC25A13Q9UJS0 675 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 PLXNA2O75051 1894 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 OBSL1O75147 1896 aa14.3□□□□□ -0.12
PCDHGB1-202ENST00000611598 FAM240BA0A1B0GVZ2 78 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 LYRM1O43325 122 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 SLC28A2O43868 658 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 IFI30P13284 250 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 EVI2BP34910 448 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 AVPR1BP47901 424 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 EFNB1P98172 346 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 C19orf57Q0VDD7 668 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TPBGQ13641 420 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 WSCD2Q2TBF2 565 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 SIGIRRQ6IA17 410 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TECPR1Q7Z6L1 1165 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 KIF18BQ86Y91 864 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 OR5D16Q8NGK9 328 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 SORCS1Q8WY21 1168 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 AP3S1Q92572 193 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 SLC9A6Q92581 669 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TREX2Q9BQ50 279 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 ZSCAN5AQ9BUG6 496 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 SIRT3Q9NTG7 399 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 ITM2BQ9Y287 266 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 PLPP1O14494 284 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 HCN1O60741 890 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 NTN1O95631 604 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TBX6O95947 436 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 DDX5P17844 614 aaKnown RBP14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 OR3A3P47888 321 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 PPP3R1P63098 170 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 ZNF284Q2VY69 593 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 SPDYE7PQ495Y7 208 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 ARSIQ5FYB1 569 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TIGD3Q6B0B8 471 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 SZRD1Q7Z422 152 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 SLC9B2Q86UD5 537 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 LHFPL3Q86UP9 236 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TMEM25Q86YD3 366 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 UFD1Q92890 307 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 UCN3Q969E3 161 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TIFAQ96CG3 184 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 HDHD5Q9BXW7 423 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TRIM45Q9H8W5 580 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 KCNK12Q9HB15 430 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 PLAGL1Q9UM63 463 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 HSPB11Q9Y547 144 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 OR2B3O76000 313 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 PDE9AO76083 593 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 LIMS3P0CW19 117 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 LIMS4P0CW20 117 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 CYP2A6P11509 494 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TIMP2P16035 220 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 CLDN20P56880 219 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 CDK5Q00535 292 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 PLCZ1Q86YW0 608 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 LRRC56Q8IYG6 542 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 ELMOD2Q8IZ81 293 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 DUSP18Q8NEJ0 188 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TMEM163Q8TC26 289 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 ZC3HAV1LQ96H79 300 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms