RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 RGS14O43566 566 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 ASNA1O43681 348 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 HS6ST1O60243 411 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 CDC40O60508 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
TUBE1-208ENST00000604743 RSL1D1O76021 490 aaKnown RBP13.31□□□□□ -0.28
TUBE1-208ENST00000604743 NADKO95544 446 aaPredicted RBP13.31□□□□□ -0.28
TUBE1-208ENST00000604743 P04436 131 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 ATP1B1P05026 303 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 BPGMP07738 259 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 CCL3P10147 92 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 MRPS35P82673 323 aaKnown RBP13.31□□□□□ -0.28
TUBE1-208ENST00000604743 HSF1Q00613 529 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 FUT7Q11130 342 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 PRICKLE4Q2TBC4 344 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 C4orf17Q53FE4 359 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 KRTCAP3Q53RY4 240 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 SH2D4BQ5SQS7 431 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 KANK2Q63ZY3 851 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 NOXRED1Q6NXP6 359 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 GALNT18Q6P9A2 607 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 FAM47EQ6ZV65 393 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 EXOC3L1Q86VI1 746 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 NUDCD3Q8IVD9 361 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 SIAH3Q8IW03 269 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 DDIASQ8IXT1 998 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 ZNF615Q8N8J6 731 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 POGLUT1Q8NBL1 392 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 FAM13CQ8NE31 585 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 OR2M7Q8NG81 312 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 PPP1R14CQ8TAE6 165 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 ZNF681Q96N22 645 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 KCNK9Q9NPC2 374 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 SACM1LQ9NTJ5 587 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 GIMAP4Q9NUV9 329 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 MAT2BQ9NZL9 334 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 ENTPD4Q9Y227 616 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 TRAF6Q9Y4K3 522 aa13.31□□□□□ -0.28
TUBE1-208ENST00000604743 USP9YO00507 2555 aaPredicted RBP13.31□□□□□ -0.28
TUBE1-208ENST00000604743 PCNX1Q96RV3 2341 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 FAM166BA8MTA8 275 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 LRATO95237 230 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 STSP08842 583 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 PCSK2P16519 638 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 S1PR1P21453 382 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 CNR1P21554 472 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 ETV4P43268 484 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 DNASE1L1P49184 302 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 MGAT2Q10469 447 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 MAP4K2Q12851 820 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 NNATQ16517 81 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 GALNTL6Q49A17 601 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 TRMT12Q53H54 448 aaKnown RBP13.3□□□□□ -0.28
TUBE1-208ENST00000604743 PRAMEF20Q5VT98 475 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 LYPD8Q6UX82 237 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 TICAM1Q8IUC6 712 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 PRR22Q8IZ63 422 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 CLYBLQ8N0X4 340 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 TAGAPQ8N103 731 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 SLC15A4Q8N697 577 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 GOLM1Q8NBJ4 401 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 SIMC1Q8NDZ2 872 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 OR7G1Q8NGA0 311 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 OR52R1Q8NGF1 315 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 OR2T11Q8NH01 316 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 C16orf52Q8NHV5 167 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 TWIST2Q8WVJ9 160 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 KAT2AQ92830 837 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 SPACA9Q96E40 222 aaPredicted RBP13.3□□□□□ -0.28
TUBE1-208ENST00000604743 C11orf24Q96F05 449 aaPredicted RBP13.3□□□□□ -0.28
TUBE1-208ENST00000604743 MAGED4Q96JG8 741 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 SGCZQ96LD1 299 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 DEFB127Q9H1M4 99 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 TUBB1Q9H4B7 451 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 ANKRA2Q9H9E1 313 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 LRTM1Q9HBL6 345 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 MIEF1Q9NQG6 463 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 SLC35C2Q9NQQ7 365 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 C1orf109Q9NX04 203 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 SIRT5Q9NXA8 310 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 DTX4Q9Y2E6 619 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 CCL27Q9Y4X3 112 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 DNAJC15Q9Y5T4 150 aa13.3□□□□□ -0.28
TUBE1-208ENST00000604743 NCKAP5O14513 1909 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 ERLIN1O75477 346 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 PDE9AO76083 593 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 LDLRP01130 860 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 MYZAPP0CAP1 466 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 DDCP20711 480 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 GPX3P22352 226 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 PIGAP37287 484 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 GSTM5P46439 218 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 SERPINB4P48594 390 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 PPIAP62937 165 aaKnown RBP13.29□□□□□ -0.28
TUBE1-208ENST00000604743 RPL38P63173 70 aaKnown RBP13.29□□□□□ -0.28
TUBE1-208ENST00000604743 PRSS53Q2L4Q9 553 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 ZNF791Q3KP31 576 aaPredicted RBP13.29□□□□□ -0.28
TUBE1-208ENST00000604743 SLC22A10Q63ZE4 541 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 FAM71E1Q6IPT2 247 aa13.29□□□□□ -0.28
TUBE1-208ENST00000604743 Q6ZSR9 355 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms